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sw_5_scaffold_316

Search features with annotation key words

Displaying items 31-57 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_316_31
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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26574..27203
DNA (630bp) protein (210aa)
RNA-binding protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2L9_9EURY
RNA-binding protein {ECO:0000313|EMBL:EMA38859.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;
RNA-binding protein
sw_5_scaffold_316_32
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


27367..28287
DNA (921bp) protein (307aa)
Probable ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00607};; 16S rRNA dimethyladenosine transferase {ECO:0000256|HAMAP-Rul
Probable ribosomal RNA small subunit methyltransferase A n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M3A2_9EURY
ksgA; dimethyladenosine transferase
sw_5_scaffold_316_33
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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28284..29501
DNA (1218bp) protein (406aa)
Mechanosensitive ion channel protein MscS n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HH12_9EURY
Mechanosensitive ion channel protein MscS {ECO:0000313|EMBL:ESP87134.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source=
mechanosensitive ion channel MscS
sw_5_scaffold_316_34
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29498..30112
DNA (615bp) protein (205aa)
Methyltransferase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L4P9_9EURY
Methyltransferase {ECO:0000313|EMBL:EMA28073.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
HemK-related putative methylase
sw_5_scaffold_316_35
Deinococcus maricopensis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(30128..30604)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U968_DEIML
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV67607.1}; TaxID=709986 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus maricopensis (
sw_5_scaffold_316_36
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30761..31765
DNA (1005bp) protein (335aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MPA4_HALMO
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000313|EMBL:EMA47481.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halo
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase
sw_5_scaffold_316_37
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31762..32874
DNA (1113bp) protein (371aa)
Methionine synthase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L831_HALJP
Methionine synthase {ECO:0000313|EMBL:EMA29767.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131.;"
methionine synthase
sw_5_scaffold_316_38
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

33023..33643
DNA (621bp) protein (207aa)
Probable molybdenum cofactor guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316}; Short=MoCo guanylyltransferase {ECO:0000256|HAMAP-Rule:MF_00316};; EC=2.7.7.77 {ECO:0000256|HAMAP-Rule:MF_00316};; G
Probable molybdenum cofactor guanylyltransferase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QSI7_9EURY
molybdopterin-guanine dinucleotide biosynthesis protein A
sw_5_scaffold_316_39
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(33782..34258)
DNA (477bp) protein (159aa)
ndk; multifunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase (EC:2.7.4.6)
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
Nucleoside diphosphate kinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VSS2_9EURY
sw_5_scaffold_316_40
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34255..34992)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWI6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36460.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
50S ribosomal protein L24E
sw_5_scaffold_316_41
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(34994..35209)
DNA (216bp) protein (72aa)
30S ribosomal protein S28e n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A479_9EURY
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1
30S ribosomal protein S28e
sw_5_scaffold_316_42
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(35216..35578)
DNA (363bp) protein (121aa)
50S ribosomal protein L7Ae n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LSC3_9EURY
rpl7ae; 50S ribosomal protein L7Ae
50S ribosomal protein L7Ae {ECO:0000256|HAMAP-Rule:MF_00326}; Ribosomal protein L8e {ECO:0000256|HAMAP-Rule:MF_00326}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
sw_5_scaffold_316_43
unknown

Not on your lists

35691..35894
DNA (204bp) protein (68aa)

This feature has no annotations

sw_5_scaffold_316_44
Trichechus manatus, Trichechus, Sirenia, Mammalia, Chordata, Metazoa

Not on your lists

36032..37687
DNA (1656bp) protein (552aa)
hypothetical protein n=1 Tax=Lactobacillus parabrevis RepID=UPI00037B2BDC
Dentin sialophosphoprotein {ECO:0000313|EMBL:ACN91289.1}; Flags: Fragment;; TaxID=127582 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sire
penicillin binding protein
sw_5_scaffold_316_45
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

37822..38169
DNA (348bp) protein (116aa)
DUF192 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITX8_NATPD
hypothetical protein
DUF192 family protein {ECO:0000313|EMBL:CAI48405.3}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (stra
sw_5_scaffold_316_46
unknown

Not on your lists

comp(38219..38419)
DNA (201bp) protein (67aa)

This feature has no annotations

sw_5_scaffold_316_47
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

38538..39293
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QQ00_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93064.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_316_trna_1
unknown

Not on your lists

39346..39429
DNA (84bp)
transferRNA
sw_5_scaffold_316_48
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

39528..39788
DNA (261bp) protein (87aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A342_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN59753.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_316_49
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

39938..40258
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MTD7_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA48896.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_5_scaffold_316_50
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

40625..41170
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E885_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ43238.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_5_scaffold_316_51
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

41483..42499
DNA (1017bp) protein (339aa)
adh7; putative zinc-binding dehydrogenase (EC:1.1.1.1)
Putative zinc-binding dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6B2_9EURY
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:EMA53411.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
sw_5_scaffold_316_52
unknown

Not on your lists

43128..43460
DNA (333bp) protein (111aa)

This feature has no annotations

sw_5_scaffold_316_53
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(43493..43792)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PR55_9EURY
hypothetical protein (DUF433)
Uncharacterized protein {ECO:0000313|EMBL:ERJ04701.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_5_scaffold_316_54
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

44050..44295
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K336_9EURY
protein of unknown function DUF217
Uncharacterized protein {ECO:0000313|EMBL:AGB38960.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_5_scaffold_316_55
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

44292..44684
DNA (393bp) protein (131aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NWJ8_HALBP
nucleic acid-binding protein, contains PIN domain
sw_5_scaffold_316_56
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(44857..47010)
DNA (2154bp) protein (718aa)
Uncharacterized protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0I7W5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ92886.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
hypothetical protein
Displaying items 31-57 of 57 in total

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