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sw_5_scaffold_316

Search features with annotation key words

Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_316_1
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..374
DNA (372bp) protein (124aa)
Stomatin-prohibitin-like protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GLR4_9EURY
Stomatin-prohibitin-like protein {ECO:0000313|EMBL:ELZ73135.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DS
stomatin-prohibitin-like protein
sw_5_scaffold_316_2
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

462..1091
DNA (630bp) protein (210aa)
MarR family transcription regulator n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GUA2_HALVD
Helix-turn-helix domain protein {ECO:0000313|EMBL:CQR50717.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
transcriptional regulator
sw_5_scaffold_316_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1293..1538)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP13_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA46190.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_316_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1982..2422
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N267_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA50805.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
deoxyribonuclease/rho motif-related TRAM
sw_5_scaffold_316_5
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2641..3318
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MVR6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49418.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_316_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3434..4069)
DNA (636bp) protein (212aa)
tRNA threonylcarbamoyladenosine biosynthesis protein n=1 Tax=Halomicrobium katesii RepID=UPI0003679848
Sua5/YciO/YrdC/YwlC family protein
Sua5/YciO/YrdC/YwlC family protein {ECO:0000313|EMBL:ACV47018.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium
sw_5_scaffold_316_7
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4119..4649)
DNA (531bp) protein (177aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8M6_HALJB
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ADJ14211.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
sw_5_scaffold_316_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4650..4940)
DNA (291bp) protein (97aa)
Glutathione S-transferase n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0J610_HALVA
gst3; glutathione S-transferase
Glutaredoxin related protein {ECO:0000313|EMBL:ERH08801.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_5_scaffold_316_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5120..6553
DNA (1434bp) protein (478aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44245.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_316_10
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6742..7176
DNA (435bp) protein (145aa)
hypothetical protein id=24634759 bin=Halorubrum_J07HR59 species=Halorubrum sp. J07HR59 genus=Halorubrum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halorubrum_J07HR59
Uncharacterized protein {ECO:0000313|EMBL:ERH05025.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
hypothetical protein
sw_5_scaffold_316_11
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7282..8124)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZZL1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58483.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
putative hydrolase or acyltransferase of alpha/beta superfamily
sw_5_scaffold_316_12
unknown

Not on your lists

comp(8316..8468)
DNA (153bp) protein (51aa)

This feature has no annotations

sw_5_scaffold_316_13
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8728..9354)
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9XD07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY59502.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_5_scaffold_316_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9356..10012)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAS6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41485.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
amino acid-binding ACT domain protein
sw_5_scaffold_316_15
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10071..10682)
DNA (612bp) protein (204aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000313|EMBL:ELY98142.1}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO
imidazoleglycerol-phosphate dehydratase (EC:4.2.1.19)
Imidazoleglycerol-phosphate dehydratase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0AJR9_NATA1
sw_5_scaffold_316_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10826..11575)
DNA (750bp) protein (250aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014, ECO:0000256|RuleBase:RU003658}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P0K8_HALMD
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase
sw_5_scaffold_316_17
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11706..12917
DNA (1212bp) protein (404aa)
Anion permease n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KJ92_HALAR
Anion permease {ECO:0000313|EMBL:EMA19885.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DSM 12282.;
anion permease
sw_5_scaffold_316_18
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13092..13952)
DNA (861bp) protein (287aa)
Alpha/beta hydrolase fold protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JA19_HALJB
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ADJ14541.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicocc
sw_5_scaffold_316_19
unknown

Not on your lists

comp(14111..14305)
DNA (195bp) protein (65aa)

This feature has no annotations

sw_5_scaffold_316_20
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14690..16561)
DNA (1872bp) protein (624aa)
Alkaline phosphatase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DEU6_9EURY
Alkaline phosphatase {ECO:0000313|EMBL:ELZ33333.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM
Alkaline phosphatase
sw_5_scaffold_316_21
unknown

Not on your lists

16871..17047
DNA (177bp) protein (59aa)

This feature has no annotations

sw_5_scaffold_316_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17190..18737
DNA (1548bp) protein (516aa)
Putative NADH dehydrogenase I, F subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NH22_9EURY
Putative NADH dehydrogenase I, F subunit {ECO:0000313|EMBL:EMA55950.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
respiratory-chain NADH dehydrogenase domain 51 kDa subunit
sw_5_scaffold_316_23
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18856..19830
DNA (975bp) protein (325aa)
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZ03_9EURY
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein {ECO:0000313|EMBL:EFW90419.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Hal
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
sw_5_scaffold_316_24
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19833..22307
DNA (2475bp) protein (825aa)
Formate dehydrogenase subunit alpha n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LW11_9EURY
Formate dehydrogenase subunit alpha {ECO:0000313|EMBL:EMA37651.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
formate dehydrogenase subunit alpha
sw_5_scaffold_316_25
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22502..22837
DNA (336bp) protein (112aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LVP6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37652.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_5_scaffold_316_26
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23020..23781)
DNA (762bp) protein (254aa)
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3S3_9EURY
dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ELY56106.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococc
sw_5_scaffold_316_27
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24071..24337
DNA (267bp) protein (89aa)
Elongation factor 1-beta n=2 Tax=Haladaptatus paucihalophilus RepID=E7QS85_9EURY
Elongation factor 1-beta {ECO:0000256|HAMAP-Rule:MF_00043, ECO:0000256|SAAS:SAAS00044427}; Short=EF-1-beta {ECO:0000256|HAMAP-Rule:MF_00043};; aEF-1beta {ECO:0000256|HAMAP-Rule:MF_00043}; TaxID=797209
tef1b; translation elongation factor aEF-1 subunit beta
sw_5_scaffold_316_28
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24650..25675)
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P249_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47278.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_316_29
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


25771..26103
DNA (333bp) protein (111aa)
50S ribosomal protein L21e n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ63_9EURY
50S ribosomal protein L21e {ECO:0000256|HAMAP-Rule:MF_00369, ECO:0000256|SAAS:SAAS00016423}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
rpl21e; 50S ribosomal protein L21e
sw_5_scaffold_316_30
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26100..26456
DNA (357bp) protein (119aa)
DNA-directed RNA polymerase subunit F {ECO:0000313|EMBL:ELY39667.1}; EC=2.7.7.6 {ECO:0000313|EMBL:ELY39667.1};; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae
hypothetical protein (EC:2.7.7.6)
DNA-directed RNA polymerase subunit F n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VRR2_9EURY
Displaying items 1-30 of 57 in total

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