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sw_5_scaffold_340

Search features with annotation key words

Displaying items 1-30 of 52 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_340_1
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..598
DNA (597bp) protein (199aa)
Amino acid transporter n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NW24_HALBP
amino acid transporter
Amino acid transporter {ECO:0000313|EMBL:ADQ69244.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense
sw_5_scaffold_340_2
unknown

Not on your lists

comp(1083..1196)
DNA (114bp) protein (38aa)

This feature has no annotations

sw_5_scaffold_340_3
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1189..1515)
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XUA1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY65384.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
sw_5_scaffold_340_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1627..3909)
DNA (2283bp) protein (761aa)
Putative nuclease/nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQF7_9EURY
Putative nuclease/nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:ELZ25471.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimp
OB-fold tRNA/helicase-type nucleic acid binding-protein
sw_5_scaffold_340_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4077..4340)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8N0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53933.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_340_6
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4833..5477)
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NA07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53929.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_340_7
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5618..8809
DNA (3192bp) protein (1064aa)
Signal-transducing histidine kinase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W754_9EURY
Signal-transducing histidine kinase {ECO:0000313|EMBL:ELY44163.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bang
HTR-like protein
sw_5_scaffold_340_8
unknown

Not on your lists

9108..9413
DNA (306bp) protein (102aa)

This feature has no annotations

sw_5_scaffold_340_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9403..10344)
DNA (942bp) protein (314aa)
HhH-GPD family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J387_HALJB
HhH-GPD family protein
HhH-GPD family protein {ECO:0000313|EMBL:ADJ15194.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali
sw_5_scaffold_340_10
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10471..10797
DNA (327bp) protein (109aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NWV5_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48315.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_340_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10852..11457)
DNA (606bp) protein (202aa)
NUDIX hydrolase family protein (EC:3.6.1.13)
Mut/nudix family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N1R9_9EURY
Mut/nudix family protein {ECO:0000313|EMBL:EMA51468.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
sw_5_scaffold_340_12
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11606..12016)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0C8L0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE57150.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
putative transcriptional regulator
sw_5_scaffold_340_13
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12073..12249)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FF34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ58525.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_5_scaffold_340_14
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12349..12624
DNA (276bp) protein (92aa)
Carbohydrate ABC transporter ATP-binding protein, CUT1 family {ECO:0000313|EMBL:ELY97753.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" sour
sw_5_scaffold_340_15
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12720..14222)
DNA (1503bp) protein (501aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=122745
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MNR2_9EURY
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A
sw_5_scaffold_340_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14222..14554)
DNA (333bp) protein (111aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CK43_9EURY
glutamyl-tRNA amidotransferase subunit C
sw_5_scaffold_340_17
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14693..15175
DNA (483bp) protein (161aa)
NUDIX hydrolase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNY0_HALUD
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACV10271.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain DSM 1
sw_5_scaffold_340_18
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15281..15826
DNA (546bp) protein (182aa)
Molecular chaperone DnaJ n=3 Tax=Halococcus hamelinensis RepID=M0M6T9_9EURY
Molecular chaperone DnaJ {ECO:0000313|EMBL:EMA41507.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
heat shock protein DnaJ domain-containing protein
sw_5_scaffold_340_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16080..16784
DNA (705bp) protein (235aa)
Phosphoglycolate phosphatase {ECO:0000256|HAMAP-Rule:MF_01419}; Short=PGP {ECO:0000256|HAMAP-Rule:MF_01419};; Short=PGPase {ECO:0000256|HAMAP-Rule:MF_01419};; EC=3.1.3.18 {ECO:0000256|HAMAP-Rule:MF_01
Phosphoglycolate phosphatase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M832_9EURY
SPP-like hydrolase
sw_5_scaffold_340_20
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16863..17558)
DNA (696bp) protein (232aa)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000256|RuleBase:RU003843}; Short=DHBP synthase {ECO:0000256|RuleBase:RU003843};; EC=4.1.99.12 {ECO:0000256|RuleBase:RU003843};; TaxID=797114 species
3,4-dihydroxy-2-butanone 4-phosphate synthase n=1 Tax=Halomicrobium katesii RepID=UPI000367D1CA
3,4-dihydroxy-2-butanone 4-phosphate synthase
sw_5_scaffold_340_21
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17560..18318)
DNA (759bp) protein (253aa)
Riboflavin kinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W857_9EURY
riboflavin kinase
Riboflavin kinase {ECO:0000313|EMBL:AGN01508.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_5_scaffold_340_22
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18561..19271
DNA (711bp) protein (237aa)
MaoC domain-containing protein dehydratase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9M5_9EURY
MaoC domain-containing protein dehydratase {ECO:0000313|EMBL:EMA42451.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
MaoC domain-containing protein dehydratase
sw_5_scaffold_340_23
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19409..19666
DNA (258bp) protein (86aa)
Transcriptional regulator, AbrB family protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E7G3_9EURY
Transcriptional regulator, AbrB family protein {ECO:0000313|EMBL:ELZ43761.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
transcriptional regulator, AbrB family
sw_5_scaffold_340_24
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19677..20084
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P392_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA64303.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 2199
hypothetical protein
sw_5_scaffold_340_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20165..20623
DNA (459bp) protein (153aa)
Thioesterase superfamily protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3Q6_9EURY
Thioesterase superfamily protein {ECO:0000313|EMBL:EMA52491.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
thioesterase superfamily protein
sw_5_scaffold_340_26
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20750..21766
DNA (1017bp) protein (339aa)
TraB family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4R9_HALJB
TraB family protein
TraB family protein {ECO:0000313|EMBL:ADJ15536.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
sw_5_scaffold_340_27
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21763..22032
DNA (270bp) protein (90aa)
Plasmid transfer protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IPU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40457.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
TraB family protein
sw_5_scaffold_340_28
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22100..22723
DNA (624bp) protein (208aa)
metalloprotease (EC:3.4.24.-)
Peptidase M50 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH55_9EURY
Peptidase M50 {ECO:0000313|EMBL:EMA44688.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;
sw_5_scaffold_340_29
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22963..24351
DNA (1389bp) protein (463aa)
phosphoribosylformylglycinamidine cyclo-ligase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370}; EC=6.3.3.1 {ECO:0000256|HAMAP-Rule:MF_00741, ECO:0000256|RuleBase:RU004370};; AIR synth
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NLN7_HALBP
sw_5_scaffold_340_30
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24488..24985)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3T4_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13425.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
Displaying items 1-30 of 52 in total

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