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sw_5_scaffold_378

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_378_1
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..279
DNA (279bp) protein (93aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YR99_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY76206.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_5_scaffold_378_2
unknown

Not on your lists

221..343
DNA (123bp) protein (41aa)

This feature has no annotations

sw_5_scaffold_378_3
unknown

Not on your lists

comp(416..652)
DNA (237bp) protein (79aa)

This feature has no annotations

sw_5_scaffold_378_4
unknown

Not on your lists

748..999
DNA (252bp) protein (84aa)

This feature has no annotations

sw_5_scaffold_378_5
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1771..2781)
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KDG9_HALAR
Uncharacterized protein {ECO:0000313|EMBL:EMA19251.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinensis DS
sw_5_scaffold_378_6
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3275..6784)
DNA (3510bp) protein (1170aa)
type ii site-specific deoxyribonuclease (EC:3.1.21.4)
Type i restriction-modification system methyltransferase subunit n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K135_9EURY
Type i restriction-modification system methyltransferase subunit {ECO:0000313|EMBL:EMA13550.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcul
sw_5_scaffold_378_7
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6878..7990)
DNA (1113bp) protein (371aa)
Site-specific recombinase xerd n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W1Q3_9EURY
site-specific recombinase xerd
Site-specific recombinase xerd {ECO:0000313|EMBL:AGN02566.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harch
sw_5_scaffold_378_trna_1
unknown

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comp(8155..8227)
DNA (73bp)
transferRNA
sw_5_scaffold_378_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8470..9174
DNA (705bp) protein (235aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1P252_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH10745.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_5_scaffold_378_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9295..10023
DNA (729bp) protein (243aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0F5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27619.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_378_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10359..11879
DNA (1521bp) protein (507aa)
Replication factor A n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYC1_9EURY
Replication factor A {ECO:0000313|EMBL:ELZ27618.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
OB-fold tRNA/helicase-type nucleic acid binding protein
sw_5_scaffold_378_11
Halorubrum distributum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12108..12566
DNA (459bp) protein (153aa)
Transcription factor CBF/NF-Y/histone domain protein n=5 Tax=Halorubrum RepID=M0D944_9EURY
Transcription factor CBF/NF-Y/histone domain protein {ECO:0000313|EMBL:ELZ45146.1}; TaxID=1227467 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Ha
transcription factor CBF/NF-Y/histone domain protein
sw_5_scaffold_378_12
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12563..13702
DNA (1140bp) protein (380aa)
Histone deacetylase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GU11_9EURY
Histone deacetylase {ECO:0000313|EMBL:ELZ75002.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
hda1; HdaI-type histone deacetylase
sw_5_scaffold_378_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13681..15048)
DNA (1368bp) protein (456aa)
CCA-adding enzyme {ECO:0000256|HAMAP-Rule:MF_01264}; EC=2.7.7.72 {ECO:0000256|HAMAP-Rule:MF_01264};; CCA tRNA nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01264}; tRNA CCA-pyrophosphorylase {ECO:
tRNA cytidylyltransferase (EC:2.7.7.72)
CCA-adding enzyme n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIB7_9EURY
sw_5_scaffold_378_14
unknown

Not on your lists

comp(15155..15430)
DNA (276bp) protein (92aa)

This feature has no annotations

sw_5_scaffold_378_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15583..16923
DNA (1341bp) protein (447aa)
5'-nucleotidase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DKX7_9EURY
5'-nucleotidase {ECO:0000313|EMBL:ELZ34814.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848
5'-nucleotidase
sw_5_scaffold_378_16
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17067..17474
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Haloferax RepID=M0H418_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ78508.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
universal stress protein UspA
sw_5_scaffold_378_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17543..18898)
DNA (1356bp) protein (452aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUD5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49352.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
mechanosensitive ion channel MscS
sw_5_scaffold_378_18
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18933..19859
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUP0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA49351.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
hypothetical protein
sw_5_scaffold_378_19
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19933..20664)
DNA (732bp) protein (244aa)
glycerophosphoryl diester phosphodiesterase (EC:3.1.4.46)
Glycerophosphodiester phosphodiesterase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MMZ8_9EURY
Glycerophosphodiester phosphodiesterase {ECO:0000313|EMBL:EMA46114.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
sw_5_scaffold_378_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20811..21143)
DNA (333bp) protein (111aa)
TrkA-N domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0ND20_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:EMA55756.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifod
TrkA-N domain family protein
Displaying 21 items

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