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sw_5_scaffold_400

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_400_trna_1
unknown

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comp(432..505)
DNA (74bp)
transferRNA
sw_5_scaffold_400_1
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

934..1860
DNA (927bp) protein (309aa)
phytoene synthase (EC:2.5.1.32); K02291 phytoene synthase [EC:2.5.1.32] id=24619582 bin=Halonotius_J07HN4 species=Halonotius sp. J07HN4 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN4
Phytoene/squalene synthetase {ECO:0000313|EMBL:ERH06999.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN4.;"
Phytoene synthase
sw_5_scaffold_400_2
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1937..4534)
DNA (2598bp) protein (866aa)
Hef nuclease n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB33_9EURY
Hef nuclease {ECO:0000313|EMBL:EMA55051.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 8989.;"
ERCC4-like helicase
sw_5_scaffold_400_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4637..5251)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MH65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA44019.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_400_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5417..6676
DNA (1260bp) protein (420aa)
NADH oxidase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MHY9_9EURY
NADH oxidase {ECO:0000313|EMBL:EMA44020.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350.;"
NAD(P)H-nitrite reductase
sw_5_scaffold_400_5
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7554..8789)
DNA (1236bp) protein (412aa)
Capsular polysaccharide biosynthesis protein-like protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NM43_HALUD
Capsular polysaccharide biosynthesis protein-like protein
Capsular polysaccharide biosynthesis protein-like protein {ECO:0000313|EMBL:ACV11251.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" s
sw_5_scaffold_400_6
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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9077..10132
DNA (1056bp) protein (352aa)
UDP-glucose 4-epimerase (EC:5.1.3.2)
Predicted protein n=2 Tax=Hordeum vulgare RepID=F2CXY7_HORVD
Uncharacterized protein {ECO:0000313|EMBL:ETX00953.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
sw_5_scaffold_400_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10233..11735)
DNA (1503bp) protein (501aa)
yidJ; arylsulfatase (EC:3.1.6.1)
Sulfatase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MTZ4_9EURY
Sulfatase {ECO:0000313|EMBL:EMA48239.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
sw_5_scaffold_400_8
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12236..12652
DNA (417bp) protein (139aa)
hypothetical protein id=24615173 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Uncharacterized protein {ECO:0000313|EMBL:ESP88342.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobo
hypothetical protein
sw_5_scaffold_400_9
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12786..12968
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YXP5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD53582.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
sw_5_scaffold_400_10
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13019..13549
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2K0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51748.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_400_11
unknown

Not on your lists

comp(13735..13995)
DNA (261bp) protein (87aa)

This feature has no annotations

sw_5_scaffold_400_12
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14051..14854)
DNA (804bp) protein (268aa)
yokD; aminoglycoside N3-acetyltransferase (EC:2.3.1.81)
Aminoglycoside N3-acetyltransferase n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0IT68_9EURY
Aminoglycoside N3-acetyltransferase {ECO:0000313|EMBL:ELZ98684.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifont
sw_5_scaffold_400_13
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14940..15332)
DNA (393bp) protein (131aa)
LD-carboxypeptidase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HDL4_9EURY
LD-carboxypeptidase {ECO:0000313|EMBL:ELZ82621.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
peptidase U61 LD-carboxypeptidase A
sw_5_scaffold_400_14
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15444..16013)
DNA (570bp) protein (190aa)
LD-carboxypeptidase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HDL4_9EURY
LD-carboxypeptidase {ECO:0000313|EMBL:ELZ82621.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513.;"
LD-carboxypeptidase
sw_5_scaffold_400_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16160..19498
DNA (3339bp) protein (1113aa)
Carbamoyl-phosphate synthase large chain {ECO:0000256|HAMAP-Rule:MF_01210}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01210};; Carbamoyl-phosphate synthetase ammonia chain {ECO:0000256|HAMAP-Rule:MF_01210
Carbamoyl-phosphate synthase large chain n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CLR1_9EURY
carbamoyl-phosphate synthase large subunit
sw_5_scaffold_400_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19606..20454)
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MQ29_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA47746.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_5_scaffold_400_17
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20645..21676
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DRR6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ37503.1}; TaxID=1227485 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum tebenquichense DSM 1
hypothetical protein
Displaying 18 items

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