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sw_5_scaffold_470

Search features with annotation key words

Displaying items 1-30 of 41 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_470_1
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3..86
DNA (84bp) protein (28aa)
Transposase {ECO:0000313|EMBL:ELZ79644.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
sw_5_scaffold_470_2
Pyramidobacter piscolens, Pyramidobacter, Synergistales, Synergistia, Synergistetes, Bacteria

Not on your lists

83..301
DNA (219bp) protein (73aa)
Na+/H+ antiporter NhaC n=1 Tax=Pyramidobacter piscolens W5455 RepID=D1Y4F3_9BACT
Na+/H+ antiporter NhaC {ECO:0000313|EMBL:EFB90849.1}; TaxID=352165 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Pyramidobacter.;" source="Pyramidobacter piscolens W545
Na+ antiporter NhaC
sw_5_scaffold_470_3
unknown

Not on your lists

389..520
DNA (132bp) protein (44aa)

This feature has no annotations

sw_5_scaffold_470_4
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(738..1838)
DNA (1101bp) protein (367aa)
(R)-citramalate synthase (EC:2.3.1.182)
(R)-citramalate synthase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWN8_9EURY
(R)-citramalate synthase {ECO:0000313|EMBL:EMA36784.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
sw_5_scaffold_470_5
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1956..2555)
DNA (600bp) protein (200aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LXE8_9EURY
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EMA36785.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
baiF1; CAIB/BAIF family protein
sw_5_scaffold_470_6
unknown

Not on your lists

2560..3132
DNA (573bp) protein (191aa)

This feature has no annotations

sw_5_scaffold_470_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3344..4366)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=2 Tax=Halococcus hamelinensis RepID=M0LVU6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37571.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_470_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4571..5641
DNA (1071bp) protein (357aa)
Xylose dehydrogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYC9_9EURY
Xylose dehydrogenase {ECO:0000313|EMBL:ELZ26894.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1
glucose-fructose oxidoreductase
sw_5_scaffold_470_9
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5767..6951
DNA (1185bp) protein (395aa)
N-acylglucosamine 2-epimerase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0B201_9EURY
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:ELZ03709.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077
N-acyl-D-glucosamine 2-epimerase
sw_5_scaffold_470_10
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7045..7545)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K0D4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA14656.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_5_scaffold_470_11
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8022..9446
DNA (1425bp) protein (475aa)
fumarase (EC:4.2.1.2)
Fumarate hydratase class II {ECO:0000256|HAMAP-Rule:MF_00743}; Short=Fumarase C {ECO:0000256|HAMAP-Rule:MF_00743};; EC=4.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00743};; TaxID=469382 species="Archaea; Euryar
Fumarate hydratase class II n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NT12_HALBP
sw_5_scaffold_470_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9517..10278)
DNA (762bp) protein (254aa)
SOUL heme-binding protein n=1 Tax=Halogranum salarium B-1 RepID=J3JEH6_9EURY
SOUL heme-binding protein {ECO:0000313|EMBL:EJN58369.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
SOUL heme-binding protein
sw_5_scaffold_470_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10346..10768)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00035E1A13
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV47027.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_470_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10943..11638)
DNA (696bp) protein (232aa)
Haloacid dehalogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NDM7_9EURY
Haloacid dehalogenase {ECO:0000313|EMBL:EMA55194.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM 89
Haloacid dehalogenase domain-containing protein hydrolase type 3
sw_5_scaffold_470_15
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11739..12230)
DNA (492bp) protein (164aa)
Putative HAD superfamily hydrolase n=1 Tax=Natronococcus occultus SP4 RepID=L0K2G9_9EURY
putative HAD superfamily hydrolase
Putative HAD superfamily hydrolase {ECO:0000313|EMBL:AGB38554.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occult
sw_5_scaffold_470_16
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12606..12965
DNA (360bp) protein (120aa)
PyrE-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MUZ1_9EURY
PyrE-like protein {ECO:0000256|HAMAP-Rule:MF_01214}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM
orotate phosphoribosyltransferase-like protein
sw_5_scaffold_470_17
unknown

Not on your lists

13153..13620
DNA (468bp) protein (156aa)

This feature has no annotations

sw_5_scaffold_470_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13669..14607)
DNA (939bp) protein (313aa)
dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI08_9EURY
Dihydrodipicolinate synthase {ECO:0000313|EMBL:EMA44973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
sw_5_scaffold_470_19
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14792..15754
DNA (963bp) protein (321aa)
PfkB domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N6Z0_9EURY
PfkB domain-containing protein {ECO:0000313|EMBL:EMA53697.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
sugar kinase, ribokinase
sw_5_scaffold_470_20
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15804..17024)
DNA (1221bp) protein (407aa)
NADH dehydrogenase, fad-containing subunit n=1 Tax=Halogranum salarium B-1 RepID=J3JFQ5_9EURY
NADH dehydrogenase, fad-containing subunit {ECO:0000313|EMBL:EJN59459.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.
NADH dehydrogenase
sw_5_scaffold_470_21
unknown

Not on your lists

17322..17561
DNA (240bp) protein (80aa)

This feature has no annotations

sw_5_scaffold_470_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17518..18396
DNA (879bp) protein (293aa)
Metallo-beta-lactamase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAZ4_9EURY
Metallo-beta-lactamase {ECO:0000313|EMBL:EMA41550.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A
metallo-beta-lactamase
sw_5_scaffold_470_23
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18561..19355
DNA (795bp) protein (265aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MAB8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA41549.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase
sw_5_scaffold_470_24
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19789..20586)
DNA (798bp) protein (266aa)
Monosaccharide-transporting ATPase n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JNV7_9EURY
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:EMA10018.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaii
monosaccharide ABC-transport system ATP binding protein
sw_5_scaffold_470_25
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20671..21684
DNA (1014bp) protein (338aa)
ABC transporter permease n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JLL9_9EURY
ABC transporter permease {ECO:0000313|EMBL:EMA10017.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
ribose ABC transporter, permease protein
sw_5_scaffold_470_26
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22118..22771
DNA (654bp) protein (218aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JM03_9EURY
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EMA10016.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" s
periplasmic binding protein/LacI transcriptional regulator
sw_5_scaffold_470_27
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22992..23867
DNA (876bp) protein (292aa)
2-keto-3-deoxyxylonate dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NC67_9EURY
2-keto-3-deoxyxylonate dehydratase {ECO:0000313|EMBL:EMA55537.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salif
2-keto-3-deoxyxylonate dehydratase
sw_5_scaffold_470_28
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24038..24910)
DNA (873bp) protein (291aa)
Ribose-5-phosphate isomerase A {ECO:0000313|EMBL:ELZ33883.1}; EC=5.3.1.6 {ECO:0000313|EMBL:ELZ33883.1};; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
rpiA; ribose 5-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase A n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DGE4_9EURY
sw_5_scaffold_470_29
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24981..26030)
DNA (1050bp) protein (350aa)
gnd1; 6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase-like protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M6U8_HALMO
6-phosphogluconate dehydrogenase-like protein {ECO:0000313|EMBL:EMA40349.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
sw_5_scaffold_470_30
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26284..28191
DNA (1908bp) protein (636aa)
Glycoside hydrolase 15-like protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MYJ2_9EURY
Glycoside hydrolase 15-like protein {ECO:0000313|EMBL:EMA49470.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
glycoside hydrolase 15-like protein
Displaying items 1-30 of 41 in total

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