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sw_5_scaffold_510

Search features with annotation key words

Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_510_1
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..159)
DNA (159bp) protein (53aa)
sdhA; succinate dehydrogenase, subunit A (flavoprotein) (EC:1.3.99.1)
Succinate dehydrogenase subunit A (Flavoprotein) n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LME4_HALWC
Succinate dehydrogenase or fumarate reductase, flavoprotein subunit {ECO:0000313|EMBL:EMA50822.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloc
sw_5_scaffold_510_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(272..1339)
DNA (1068bp) protein (356aa)
Ion transport 2 domain-containing protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFZ7_9EURY
Ion transport 2 domain-containing protein {ECO:0000313|EMBL:EMA43350.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
ion transport 2 domain protein
sw_5_scaffold_510_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1817..2683)
DNA (867bp) protein (289aa)
Succinate dehydrogenase and fumarate reductase iron-sulfur protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJ84_9EURY
Succinate dehydrogenase and fumarate reductase iron-sulfur protein {ECO:0000313|EMBL:EMA45767.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloco
succinate dehydrogenase and fumarate reductase iron-sulfur protein
sw_5_scaffold_510_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2724..3098)
DNA (375bp) protein (125aa)
sdhD; succinate dehydrogenase subunit D (membrane anchor protein) (EC:1.3.99.1)
Succinate dehydrogenase subunit D n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYM3_9EURY
Succinate dehydrogenase subunit D {ECO:0000313|EMBL:EMA50827.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifo
sw_5_scaffold_510_5
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3100..3504)
DNA (405bp) protein (135aa)
Succinate dehydrogenase, cytochrome b556 subunit n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8T4_9EURY
succinate dehydrogenase, cytochrome b556 subunit
Succinate dehydrogenase, cytochrome b556 subunit {ECO:0000313|EMBL:AGN00909.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salin
sw_5_scaffold_510_6
Helobdella robusta, Helobdella, Rhynchobdellida, Hirudinea, Annelida, Metazoa

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3755..4879
DNA (1125bp) protein (375aa)
Uncharacterized protein {ECO:0000313|EMBL:ESN94636.1, ECO:0000313|EnsemblMetazoa:HelroP68929}; TaxID=6412 species="Eukaryota; Metazoa; Lophotrochozoa; Annelida; Clitellata; Hirudinida; Hirudinea; Rhyn
sw_5_scaffold_510_7
unknown

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5109..5468
DNA (360bp) protein (120aa)

This feature has no annotations

sw_5_scaffold_510_8
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5793..7307)
DNA (1515bp) protein (505aa)
Phosphoesterase RecJ domain protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JT38_NATP1
single-stranded DNA-specific exonuclease
Phosphoesterase RecJ domain protein {ECO:0000313|EMBL:ELY70655.1}; Single-stranded DNA-specific exonuclease {ECO:0000313|EMBL:AGB33556.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; N
sw_5_scaffold_510_9
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7464..8288)
DNA (825bp) protein (275aa)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:EMA36199.1}; EC=4.2.1.75 {ECO:0000313|EMBL:EMA36199.1};; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Uroporphyrinogen-III synthase n=2 Tax=Halococcus hamelinensis RepID=M0LUZ4_9EURY
hemD; uroporphyrinogen-III synthase
sw_5_scaffold_510_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8285..9466)
DNA (1182bp) protein (394aa)
hydroxymethylbilane synthase (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9U1_9EURY
Porphobilinogen deaminase {ECO:0000313|EMBL:EMA42496.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticu
sw_5_scaffold_510_11
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9632..10027
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9Y1H6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY66733.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
hypothetical protein
sw_5_scaffold_510_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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10034..10417
DNA (384bp) protein (128aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
hypothetical PIN domain protein id=24613662 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
hypothetical PIN domain protein
sw_5_scaffold_510_13
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10991..11350
DNA (360bp) protein (120aa)
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I8K9_HALRX
serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase {ECO:0000313|EMBL:AGB15148.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;
Displaying 13 items

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