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sw_5_scaffold_519

Search features with annotation key words

Displaying 25 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_519_1
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..134)
DNA (132bp) protein (44aa)
Uncharacterized protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BQ18_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ12423.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans D
sw_5_scaffold_519_2
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(402..1565)
DNA (1164bp) protein (388aa)
Acyl-CoA dehydrogenase 1 n=1 Tax=Halogranum salarium B-1 RepID=J2ZG60_9EURY
Acyl-CoA dehydrogenase 1 {ECO:0000313|EMBL:EJN59660.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
acyl-CoA dehydrogenase
sw_5_scaffold_519_3
unknown

Not on your lists

1700..1927
DNA (228bp) protein (76aa)

This feature has no annotations

sw_5_scaffold_519_4
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2101..2883)
DNA (783bp) protein (261aa)
Glutamine amidotransferase class-I n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J550_HALJB
glutamine amidotransferase
Glutamine amidotransferase {ECO:0000313|EMBL:AJF25832.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;
sw_5_scaffold_519_5
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3329..4615)
DNA (1287bp) protein (429aa)
Periplasmic copper-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QZS9_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EFW89823.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
periplasmic copper-binding protein
sw_5_scaffold_519_6
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4893..6584
DNA (1692bp) protein (564aa)
Sodium:pantothenate symporter n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X0Z1_9EURY
Sodium:pantothenate symporter {ECO:0000313|EMBL:ELY55390.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolytic
Na+/proline symporter
sw_5_scaffold_519_7
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6609..7193
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X0V6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY55389.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
hypothetical protein
sw_5_scaffold_519_8

Not on your lists

7262..8473
DNA (1212bp) protein (404aa)
Alcohol dehydrogenase, class IV n=1 Tax=uncultured archaeon A07HB70 RepID=V4XZC7_9ARCH
Alcohol dehydrogenase, class IV {ECO:0000313|EMBL:ESS07663.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
alcohol dehydrogenase
sw_5_scaffold_519_9

Not on your lists

comp(8811..10334)
DNA (1524bp) protein (508aa)
betaine-aldehyde dehydrogenase (EC:1.2.1.8)
NAD-dependent aldehyde dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y7F7_9ARCH
NAD-dependent aldehyde dehydrogenase {ECO:0000313|EMBL:ESS06992.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
sw_5_scaffold_519_10

Not on your lists

comp(10404..11525)
DNA (1122bp) protein (374aa)
Threonine dehydrogenase related Zn-dependent dehydrogenase n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y233_9ARCH
Threonine dehydrogenase related Zn-dependent dehydrogenase {ECO:0000313|EMBL:ESS06651.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
threonine dehydrogenase
sw_5_scaffold_519_11
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11759..13069
DNA (1311bp) protein (437aa)
Metal-dependent cyclase n=1 Tax=Natrialba asiatica (strain ATCC 700177 / DSM 12278 / JCM 9576 / FERM P-10747 / NBRC 102637 / 172P1) RepID=M0ALX0_NATA1
Metal-dependent cyclase {ECO:0000313|EMBL:ELY98912.1}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATCC 7001
secreted metal-dependent enzyme of cyclase family
sw_5_scaffold_519_12
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13267..14028)
DNA (762bp) protein (254aa)
3-hydroxybutyryl-CoA dehydrogenase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X2P3_9EURY
3-hydroxybutyryl-CoA dehydrogenase {ECO:0000313|EMBL:ELY56004.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylo
enoyl-CoA hydratase/isomerase
sw_5_scaffold_519_13
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14108..14473)
DNA (366bp) protein (122aa)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUX7_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA36179.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
hypothetical protein
sw_5_scaffold_519_14
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14607..15827)
DNA (1221bp) protein (407aa)
acs_5; acyl-CoA synthetase I 5 (EC:6.2.1.-)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LUX7_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA36179.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hame
sw_5_scaffold_519_15
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16497..18479)
DNA (1983bp) protein (661aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WLP3_9EURY
sw_5_scaffold_519_16
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18430..19251)
DNA (822bp) protein (274aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MHW0_HALMO
Suspect SCG annotation. See neighboring gene [sw_5_scaffold_519_15].
sw_5_scaffold_519_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19581..21098
DNA (1518bp) protein (506aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QR91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92999.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_519_18
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21279..22970
DNA (1692bp) protein (564aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QW62_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW91196.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_519_19
unknown

Not on your lists

comp(23010..23183)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_5_scaffold_519_20
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23216..24190)
DNA (975bp) protein (325aa)
Replication factor C small subunit n=2 Tax=Halonotius RepID=U1NVF7_9EURY
Replication factor C small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; Short=RFC small subunit {ECO:0000256|HAMAP-Rule:MF_01509};; Clamp loader small subunit {ECO:0000256|HAMAP-Rule:MF_01509}; TaxID=10
DNA polymerase III, gamma/tau subunit
sw_5_scaffold_519_21
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24322..24519
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JC11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA05908.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
hypothetical protein
sw_5_scaffold_519_22
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24527..24970
DNA (444bp) protein (148aa)
N-acetyltransferase GCN5 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N5N0_9EURY
N-acetyltransferase GCN5 {ECO:0000313|EMBL:EMA52863.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis J
putative acetyltransferase
sw_5_scaffold_519_23
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25002..26384)
DNA (1383bp) protein (461aa)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I n=1 Tax=Natronococcus jeotgali DSM 18795 RepID=L9XR87_9EURY
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I {ECO:0000313|EMBL:ELY64329.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
sw_5_scaffold_519_24

Not on your lists

comp(26997..27542)
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4ZXF8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS07690.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
carboxymuconolactone decarboxylase
sw_5_scaffold_519_25
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27741..29648
DNA (1908bp) protein (636aa)
Dipeptidyl aminopeptidase/acylaminoacyl peptidase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NFP8_9EURY
Dipeptidyl aminopeptidase/acylaminoacyl peptidase {ECO:0000313|EMBL:EMA56671.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="H
dipeptidyl aminopeptidase/acylaminoacyl peptidase
Displaying 25 items

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