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sw_5_scaffold_54

Search features with annotation key words

Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_54_1
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2..151
DNA (150bp) protein (50aa)
HGPRTase-like protein {ECO:0000256|HAMAP-Rule:MF_01467}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_01467};; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrin
HGPRTase-like protein n=4 Tax=Natrinema RepID=I7CMJ8_NATSJ
phosphoribosyltransferase
sw_5_scaffold_54_2
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

249..2165
DNA (1917bp) protein (639aa)
Extracellular solute-binding protein family 5 n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML79_9EURY
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:EMA45484.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
dppA; ABC-type transport system periplasmic substrate-binding protein (probable substrate dipeptide/oligopeptide/nickel)
sw_5_scaffold_54_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2233..3207
DNA (975bp) protein (325aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM26_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA45485.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
binding-protein-dependent transporters inner membrane component
sw_5_scaffold_54_4
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3207..4391
DNA (1185bp) protein (395aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MX05_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA50106.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcu
binding-protein-dependent transporters inner membrane component
sw_5_scaffold_54_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4388..5446
DNA (1059bp) protein (353aa)
Peptide ABC transporter ATPase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MIF3_9EURY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EMA45487.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
dppD; ABC-type transport system ATP-binding protein (probable substrate dipeptide/oligopeptide/nickel)
sw_5_scaffold_54_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5439..6797
DNA (1359bp) protein (453aa)
Peptide ABC transporter ATPase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJF6_9EURY
Peptide ABC transporter ATPase {ECO:0000313|EMBL:EMA45488.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
peptide ABC transporter ATPase
sw_5_scaffold_54_7
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6900..7586
DNA (687bp) protein (229aa)
ThiJ/PfpI domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MXR5_9EURY
ThiJ/PfpI domain-containing protein {ECO:0000313|EMBL:EMA45483.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sacc
putative intracellular protease/amidase
sw_5_scaffold_54_8
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7842..8423)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2N6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51788.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
GtrA-like family protein
sw_5_scaffold_54_9
Natronococcus jeotgali, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8584..8955
DNA (372bp) protein (124aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P2P6_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY64649.1}; TaxID=1227498 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus jeotgali DSM 187
sw_5_scaffold_54_10
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9067..9432
DNA (366bp) protein (122aa)
Nitrogen-fixing NifU domain-containing protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MVG4_HALMO
Nitrogen-fixing NifU domain-containing protein {ECO:0000313|EMBL:EMA48789.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
nitrogen-fixing NifU domain-containing protein
sw_5_scaffold_54_11
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9622..10926)
DNA (1305bp) protein (435aa)
Uncharacterized protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZ23_HALTV
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01398.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_5_scaffold_54_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11002..11526)
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0MA65_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA41494.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_54_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11736..12866
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3ETY9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57702.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_54_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13013..13396
DNA (384bp) protein (128aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9K8_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EMA54637.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
short-chain dehydrogenase/reductase SDR
sw_5_scaffold_54_15
unknown

Not on your lists

comp(13445..13606)
DNA (162bp) protein (54aa)

This feature has no annotations

sw_5_scaffold_54_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13746..14687)
DNA (942bp) protein (314aa)
Periplasmic copper-binding protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QT76_9EURY
Periplasmic copper-binding protein {ECO:0000313|EMBL:EFW91805.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus pa
sw_5_scaffold_54_17
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14880..16394
DNA (1515bp) protein (505aa)
Arylsulfatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QXV7_9EURY
Arylsulfatase {ECO:0000313|EMBL:EFW90658.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophilus DX253.;
arylsulfatase
sw_5_scaffold_54_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16605..20522)
DNA (3918bp) protein (1306aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1227455 species="Archaea; Eurya
DNA polymerase II large subunit n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBQ1_9EURY
DNA polymerase D polymerase subunit DP2
sw_5_scaffold_54_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20743..21240)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M765_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40220.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
sw_5_scaffold_54_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21462..22787)
DNA (1326bp) protein (442aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N986_9EURY
Oligopeptide/dipeptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:EMA53669.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;"
oligopeptide/dipeptide ABC transporter ATPase
sw_5_scaffold_54_21
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22780..24039)
DNA (1260bp) protein (420aa)
Oligopeptide/dipeptide ABC transporter ATP-binding protein n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMN4_HALBP
oligopeptide/dipeptide ABC transporter ATP-binding protein
Oligopeptide/dipeptide ABC transporter ATPase {ECO:0000313|EMBL:EMA65700.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
sw_5_scaffold_54_22
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24125..25165)
DNA (1041bp) protein (347aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMN5_HALBP
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADQ66190.1}; Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELY27315.1}; TaxID=4
sw_5_scaffold_54_23
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25201..26199)
DNA (999bp) protein (333aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NMN6_HALBP
dipeptide/oligopeptide/nickel ABC transporter permease
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:ADQ66191.1}; Dipeptide/oligopeptide/nickel ABC transporter permease {ECO:0000313|EMBL:ELY27314.1}; TaxID=4
sw_5_scaffold_54_24
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26403..28106)
DNA (1704bp) protein (568aa)
Peptide ABC transporter substrate-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0DFY7_9EURY
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ33637.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="
peptide ABC transporter substrate-binding protein
sw_5_scaffold_54_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28587..29435
DNA (849bp) protein (283aa)
putative inosine monophosphate dehydrogenase (EC:1.1.1.205)
Putative inosine monophosphate dehydrogenase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBL2_9EURY
Putative inosine monophosphate dehydrogenase {ECO:0000313|EMBL:EMA42738.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
sw_5_scaffold_54_26
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


29654..31534
DNA (1881bp) protein (627aa)
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA ligase {ECO:0000313|EMBL:ELY33009.1}; EC=6.1.1.14 {ECO:0000313|EMBL:ELY33009.1};; Glycyl-tRNA synthetase {ECO:0000313|EMBL:ADJ13516.1}; EC=6.1.1.14 {ECO:0000313|EMBL:ADJ13516.1};; TaxID=79
Glycyl-tRNA ligase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J4F4_HALJB
sw_5_scaffold_54_27
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

31531..32004
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ME97_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42740.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_54_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

32387..34396
DNA (2010bp) protein (670aa)
Aldo/keto reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CX55_9EURY
Aldo/keto reductase {ECO:0000313|EMBL:ELZ26997.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
aldo/keto reductase
sw_5_scaffold_54_29
unknown

Not on your lists

comp(34519..34680)
DNA (162bp) protein (54aa)

This feature has no annotations

sw_5_scaffold_54_30
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34872..35906)
DNA (1035bp) protein (345aa)
Phosphoribosylaminoimidazole-succinocarboxamide synthase {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:ELZ82749.1}; EC=6.3.2.6 {ECO:0000256|HAMAP-Rule:MF_00137, ECO:0000313|EMBL:ELZ82749.1};; SAI
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HI27_9EURY
Displaying items 1-30 of 43 in total

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