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sw_5_scaffold_550

Search features with annotation key words

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_550_1
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2..520)
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9Z299_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY80011.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_5_scaffold_550_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(599..1531)
DNA (933bp) protein (311aa)
Cruxrhodopsin-2 n=2 Tax=Halobacteriaceae RepID=BACR_HALSR
rhodopsin
Rhodopsin {ECO:0000313|EMBL:ACV47404.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 7
sw_5_scaffold_550_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1634..3838)
DNA (2205bp) protein (735aa)
Bacterio-opsin activator n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D066_9EURY
Bacterio-opsin activator {ECO:0000313|EMBL:ELZ28901.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2
bat; receiver/sensor/bat box HTH-10 family transcription regulator Bat (homolog to bacterioopsin activator)
sw_5_scaffold_550_4
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4023..4910
DNA (888bp) protein (296aa)
crtY; lycopene cyclase (EC:1.14.-.-); K00517 [EC:1.14.-.-] id=24643140 bin=halophilic_archaeon_J07HB67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HB67
crtY; lycopene cyclase (EC:1.14.-.-)
Lycopene cyclase domain protein {ECO:0000313|EMBL:ERH12919.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
sw_5_scaffold_550_5
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4907..5953
DNA (1047bp) protein (349aa)
Brp-like protein-like n=2 Tax=Haloarcula RepID=Q5V0N2_HALMA
blh; Brp-like protein-like
Brp-like protein {ECO:0000313|EMBL:EMA20356.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.;
sw_5_scaffold_550_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5834..7792)
DNA (1959bp) protein (653aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW93935.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_5_scaffold_550_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7963..8874
DNA (912bp) protein (304aa)
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K8I9_9EURY
Phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase {ECO:0000313|EMBL:EMA16160.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
phosphoribose diphosphate:decaprenyl-phosphate phosphoribosyltransferase
sw_5_scaffold_550_8
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8871..9611
DNA (741bp) protein (247aa)
PHP domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N646_9EURY
PHP domain-containing protein {ECO:0000313|EMBL:EMA53407.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
histidinol phosphatase
sw_5_scaffold_550_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9725..10720
DNA (996bp) protein (332aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J779_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ13974.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_5_scaffold_550_10
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10884..11639)
DNA (756bp) protein (252aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9G2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42432.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
Displaying 10 items

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