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sw_5_scaffold_678

Search features with annotation key words

Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_678_1
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..642)
DNA (642bp) protein (214aa)
Nuclease n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J651_HALJB
nuclease
Nuclease {ECO:0000313|EMBL:ELY37207.1}; Nuclease (SNase domain protein) {ECO:0000313|EMBL:ADJ15769.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
sw_5_scaffold_678_2
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(891..1523)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CE17_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ20893.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
sw_5_scaffold_678_3
unknown

Not on your lists

1827..1919
DNA (93bp) protein (31aa)

This feature has no annotations

sw_5_scaffold_678_4
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2085..2387
DNA (303bp) protein (101aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HQZ8_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM55789.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_5_scaffold_678_5
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2557..3018)
DNA (462bp) protein (154aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0L186_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA25765.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_5_scaffold_678_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3140..4606)
DNA (1467bp) protein (489aa)
phbC, phaC1; polyhydroxyalkanoate synthase PhaC (EC:2.3.1.-)
Poly(R)-hydroxyalkanoic acid synthase subunit PhaC n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MAQ3_9EURY
Poly(R)-hydroxyalkanoic acid synthase subunit PhaC {ECO:0000313|EMBL:EMA42831.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
sw_5_scaffold_678_7
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4613..5206)
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NAV4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53790.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_5_scaffold_678_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5285..5935)
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M7P9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40634.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_678_9
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5932..6285)
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDS0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA42834.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_678_10
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6403..7302)
DNA (900bp) protein (300aa)
Alpha/beta hydrolase fold protein n=3 Tax=Halococcus hamelinensis RepID=M0M4L5_9EURY
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:EMA40631.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hameli
alpha/beta hydrolase fold protein
sw_5_scaffold_678_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7433..7990)
DNA (558bp) protein (186aa)
KEOPS complex Cgi121-like subunit n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N7E3_9EURY
KEOPS complex Cgi121-like subunit {ECO:0000313|EMBL:EMA53796.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thaila
hypothetical protein
sw_5_scaffold_678_12
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7998..10271)
DNA (2274bp) protein (758aa)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
mer3_1; ski2-like helicase (EC:3.6.1.-)
Putative ski2-type helicase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NBP7_9EURY
sw_5_scaffold_678_13
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10654..10899
DNA (246bp) protein (82aa)
Ferredoxin n=2 Tax=Archaea RepID=U1NYY7_9EURY
Ferredoxin {ECO:0000313|EMBL:ERH02744.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
hypothetical protein
sw_5_scaffold_678_14
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10973..11887)
DNA (915bp) protein (305aa)
malate/lactate dehydrogenase (EC:1.1.1.37)
Malate/lactate dehydrogenase {ECO:0000313|EMBL:AGB39724.1}; EC=1.1.1.37 {ECO:0000313|EMBL:AGB39724.1};; Flags: Precursor;; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Nat
Malate/lactate dehydrogenase n=1 Tax=Natronococcus occultus SP4 RepID=L0K5R3_9EURY
sw_5_scaffold_678_15
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12099..12899
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0ENG4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ48447.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
UPF0148 family protein
sw_5_scaffold_678_16
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13185..13787)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4K1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40616.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_678_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14055..14600
DNA (546bp) protein (182aa)
UPF0290 protein HSB1_17420 n=1 Tax=Halogranum salarium B-1 RepID=J3JFV5_9EURY
UPF0290 protein HSB1_17420 {ECO:0000256|HAMAP-Rule:MF_01117}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
conserved hypothetical membrane protein, putative CDP-diglyceride synthetase (DUF46)
sw_5_scaffold_678_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14815..15264
DNA (450bp) protein (150aa)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MCP9_9EURY
sw_5_scaffold_678_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15451..16890
DNA (1440bp) protein (480aa)
Xanthine/uracil/vitamin C permease n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5Y0_9EURY
Xanthine/uracil/vitamin C permease {ECO:0000313|EMBL:EMA40813.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamel
xanthine/uracil/vitamin C permease
sw_5_scaffold_678_20
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17256..18644
DNA (1389bp) protein (463aa)
Arylsulfotransferase (ASST) n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MN43_9EURY
Arylsulfotransferase (ASST) {ECO:0000313|EMBL:ERG91234.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J0
arylsulfotransferase
sw_5_scaffold_678_21
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18748..19026
DNA (279bp) protein (93aa)
Putative glutaredoxin n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0M9L9_9EURY
Putative glutaredoxin {ECO:0000313|EMBL:EMA42446.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
glutaredoxin
sw_5_scaffold_678_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19176..19928
DNA (753bp) protein (251aa)
dehydrogenase (EC:1.-.-.-)
Dehydrogenase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWN4_9EURY
Dehydrogenase {ECO:0000313|EMBL:EMA37987.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
sw_5_scaffold_678_23
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(20091..20681)
DNA (591bp) protein (197aa)
hypothetical protein n=1 Tax=Chlorogloeopsis RepID=UPI00031B2179
GCN5-related N-acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:AFZ31757.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 7428.;"
sw_5_scaffold_678_24
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20922..21806
DNA (885bp) protein (295aa)
Short chain dehydrogenase/reductase family oxidoreductase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J8I8_HALJB
short chain dehydrogenase/reductase family oxidoreductase
Short chain dehydrogenase/reductase family oxidoreductase {ECO:0000313|EMBL:ADJ16234.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.
sw_5_scaffold_678_trna_1
unknown

Not on your lists

comp(22125..22199)
DNA (75bp)
transferRNA
sw_5_scaffold_678_25
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22323..22964
DNA (642bp) protein (214aa)
Dephospho-CoA kinase-like protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MBR0_9EURY
Dephospho-CoA kinase-like protein {ECO:0000313|EMBL:EMA42783.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccha
Dephospho-CoA kinase-like protein
sw_5_scaffold_678_26
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22997..23404
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MDM9_9EURY
UPF0201 protein C449_16618 {ECO:0000256|HAMAP-Rule:MF_01112}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharol
hypothetical protein
sw_5_scaffold_678_27
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23452..24090
DNA (639bp) protein (213aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M4S7_9EURY
HAD-superfamily hydrolase, subfamily IA, variant 1 {ECO:0000313|EMBL:EMA40817.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="
haloacid dehalogenase
sw_5_scaffold_678_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24186..24797)
DNA (612bp) protein (204aa)
Sulfite oxidase-like oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NF76_9EURY
Sulfite oxidase-like oxidoreductase {ECO:0000313|EMBL:EMA55345.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sali
soxA1; sulfite oxidase
Displaying 29 items

View Taxonomy