ggKbase home page

sw_5_scaffold_727

Search features with annotation key words

Displaying 25 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_727_1
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GQY8_9EURY
2-hydroxyhepta-2,4-diene-1, 7-dioate isomerase {ECO:0000313|EMBL:ESP87466.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" so
2-hydroxyhepta-24-diene-1,7-dioate isomerase
sw_5_scaffold_727_2
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(457..1395)
DNA (939bp) protein (313aa)
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0A2M0_9EURY
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ELY92102.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natria
3-hydroxyacyl-CoA dehydrogenase NAD-binding protein
sw_5_scaffold_727_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1618..2436)
DNA (819bp) protein (273aa)
2,5-didehydrogluconate reductase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYG3_9EURY
2,5-didehydrogluconate reductase {ECO:0000313|EMBL:ELZ27668.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsb
aldo/keto reductase
sw_5_scaffold_727_4
unknown

Not on your lists

comp(2509..2613)
DNA (105bp) protein (35aa)

This feature has no annotations

sw_5_scaffold_727_5
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2857..3639
DNA (783bp) protein (261aa)
3-ketoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:ELY69896.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ELY69896.1};; Uncharacterized protein {ECO:0000313|EMBL:AFZ72956.1}; TaxID=797304 species="Arc
3-ketoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AGK6_NATGS
dehydrogenase
sw_5_scaffold_727_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3751..5292)
DNA (1542bp) protein (514aa)
ABC transporter substrate-binding protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D1B5_9EURY
ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ27939.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeom
TonB-dependent receptor plug
sw_5_scaffold_727_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5423..6742)
DNA (1320bp) protein (440aa)
SAF domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCD5_9EURY
SAF domain-containing protein {ECO:0000313|EMBL:EMA54764.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
dihydrodipicolinate reductase
sw_5_scaffold_727_8

Not on your lists

comp(6871..7974)
DNA (1104bp) protein (368aa)
Malate/L-lactate dehydrogenase n=1 Tax=uncultured archaeon A07HR60 RepID=V4YLY5_9ARCH
Malate/L-lactate dehydrogenase {ECO:0000313|EMBL:ESS12602.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
hypothetical protein
sw_5_scaffold_727_9
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8008..9195)
DNA (1188bp) protein (396aa)
Aspartyl/glutamyl-tRNA amidotransferase subunit A {ECO:0000313|EMBL:EMA07522.1}; EC=6.3.5.- {ECO:0000313|EMBL:EMA07522.1};; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; H
Aspartyl/glutamyl-tRNA amidotransferase subunit A n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JEH1_9EURY
amidase, Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
sw_5_scaffold_727_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9536..10342
DNA (807bp) protein (269aa)
Oxidoreductase-like protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9J7_9EURY
Oxidoreductase-like protein {ECO:0000313|EMBL:EMA54253.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
inb; oxidoreductase-like
sw_5_scaffold_727_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10713..11744
DNA (1032bp) protein (344aa)
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4IXU5_9EURY
D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein {ECO:0000313|EMBL:ESP87982.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candida
D-3-phosphoglycerate dehydrogenase
sw_5_scaffold_727_12
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12144..12938
DNA (795bp) protein (265aa)
HpcH/HpaI aldolase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWW9_9EURY
HpcH/HpaI aldolase {ECO:0000313|EMBL:EMA38057.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100A6.;"
hypothetical protein
sw_5_scaffold_727_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13052..14176
DNA (1125bp) protein (375aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CXI8_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ELZ27930.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Ha
mandelate racemase/muconate lactonizing enzyme family protein
sw_5_scaffold_727_14
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14349..15608
DNA (1260bp) protein (420aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JBS9_HALJB
mandelate racemase/muconate lactonizing protein
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:ADJ16732.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source=
sw_5_scaffold_727_15
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15924..16916
DNA (993bp) protein (331aa)
Aldo/keto reductase n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SQX9_9EURY
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:AGN00761.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_5_scaffold_727_16
Geoglobus acetivorans, Geoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(17027..17995)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI000360905A
Beta-lactamase domain protein
Beta-lactamase domain protein {ECO:0000313|EMBL:AIY90541.1}; TaxID=565033 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Geoglobus.;" source="Geoglobus acetivorans.;
sw_5_scaffold_727_17
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18055..18438)
DNA (384bp) protein (128aa)
Methylmalonyl-CoA epimerase n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MP05_9EURY
Methylmalonyl-CoA epimerase {ECO:0000313|EMBL:EMA46180.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyti
hypothetical protein
sw_5_scaffold_727_18
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18627..19793)
DNA (1167bp) protein (389aa)
Mandelate racemase/muconate lactonizing enzyme family protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0ML93_9EURY
Mandelate racemase/muconate lactonizing enzyme family protein {ECO:0000313|EMBL:EMA46143.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.
mandelate racemase/muconate lactonizing enzyme family protein
sw_5_scaffold_727_19
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19909..20682)
DNA (774bp) protein (258aa)
4-hydroxy-2-oxovalerate aldolase (EC:4.1.3.39)
4-hydroxy-2-oxovalerate aldolase n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3D5_9EURY
4-hydroxy-2-oxovalerate aldolase {ECO:0000313|EMBL:ELY56117.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amyloly
sw_5_scaffold_727_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21453..22127
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8Q5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA54261.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_5_scaffold_727_21
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22431..23393
DNA (963bp) protein (321aa)
Galactonate dehydratase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KT19_HALH1
Uncharacterized protein {ECO:0000313|EMBL:ETW99875.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
galactonate dehydratase
sw_5_scaffold_727_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23498..24712
DNA (1215bp) protein (405aa)
Mandelate racemase/muconate lactonizing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8M2_9EURY
Mandelate racemase/muconate lactonizing protein {ECO:0000313|EMBL:EMA54312.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
Mandelate racemase/muconate lactonizing protein
sw_5_scaffold_727_23
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24753..25973)
DNA (1221bp) protein (407aa)
Muconate lactonizing mandelate racemase protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NB35_9EURY
Muconate lactonizing mandelate racemase protein {ECO:0000313|EMBL:EMA54314.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Hal
muconate lactonizing mandelate racemase protein
sw_5_scaffold_727_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26192..27322)
DNA (1131bp) protein (377aa)
Glucose-fructose oxidoreductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NCA9_9EURY
Glucose-fructose oxidoreductase {ECO:0000313|EMBL:EMA54315.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
oxidoreductase domain-containing protein
sw_5_scaffold_727_25
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27507..28565)
DNA (1059bp) protein (353aa)
L-rhamnonate dehydratase (EC:4.2.1.90)
L-rhamnonate dehydratase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N8V0_9EURY
L-rhamnonate dehydratase {ECO:0000313|EMBL:EMA54316.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
Displaying 25 items

View Taxonomy