ggKbase home page

sw_5_scaffold_917

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_917_1
unknown

Not on your lists

comp(1..132)
DNA (132bp) protein (44aa)

This feature has no annotations

sw_5_scaffold_917_2
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(234..527)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0JTQ5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA11045.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_5_scaffold_917_3
Paenibacillus mucilaginosus, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

607..1086
DNA (480bp) protein (160aa)
Uncharacterized protein n=1 Tax=Paenibacillus mucilaginosus 3016 RepID=H6NPS0_9BACL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFC33426.1}; TaxID=1116391 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus mucilaginosus 3016.;"
sw_5_scaffold_917_4
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1177..1557)
DNA (381bp) protein (127aa)
Translation initiation inhibitor n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IGJ1_9EURY
Translation initiation inhibitor {ECO:0000313|EMBL:ELZ95900.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC B
tii; translation initiation inhibitor
sw_5_scaffold_917_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1850..3142
DNA (1293bp) protein (431aa)
Major facilitator superfamily protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MQG2_9EURY
Major facilitator superfamily protein {ECO:0000313|EMBL:EMA46979.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sa
major facilitator superfamily protein
sw_5_scaffold_917_6
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3189..4451)
DNA (1263bp) protein (421aa)
Major facilitator superfamily transporter quinolone resistance protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MSE4_9EURY
Major facilitator superfamily transporter quinolone resistance protein {ECO:0000313|EMBL:EMA47390.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Ha
major facilitator superfamily protein
sw_5_scaffold_917_7
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4712..5275)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KHB4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA19534.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_5_scaffold_917_8
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

5595..6719
DNA (1125bp) protein (375aa)
Metallo-beta-lactamase domain protein n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WL10_METH6
Metallo-beta-lactamase domain protein
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:AET63564.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methan
sw_5_scaffold_917_9
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6811..7656)
DNA (846bp) protein (282aa)
aldo/keto reductase n=1 Tax=Halococcus hamelinensis RepID=UPI00029AA9CC
aldo/keto reductase
Aldo/keto reductase {ECO:0000313|EMBL:ADJ15114.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgali (s
sw_5_scaffold_917_10
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7806..10619)
DNA (2814bp) protein (938aa)
DEAD/H associated domain protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NR67_HALUD
ATP-dependent helicase
DEAD/H associated domain protein {ECO:0000313|EMBL:ACV12980.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahen
sw_5_scaffold_917_11
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10796..11464
DNA (669bp) protein (223aa)
Type 11 methyltransferase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A7N8_9EURY
Type 11 methyltransferase {ECO:0000313|EMBL:ELY94790.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.
methyltransferase type 11
sw_5_scaffold_917_12
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11647..12012
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0IE15_HALRX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB16207.1}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 18193 /
sw_5_scaffold_917_13
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12272..12676
DNA (405bp) protein (135aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IC14_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04094.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_5_scaffold_917_14
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12758..13513
DNA (756bp) protein (252aa)
Beta-lactamase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3L0_9EURY
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EMA52456.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
beta-lactamase domain-containing protein
sw_5_scaffold_917_15
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13617..14846)
DNA (1230bp) protein (410aa)
Arabinose efflux permease n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CW58_9EURY
Arabinose efflux permease {ECO:0000313|EMBL:ELZ26104.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum
sugar transporter
sw_5_scaffold_917_16
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14992..16947)
DNA (1956bp) protein (652aa)
ABC transporter related protein id=2877055 bin=GWC2_Chloroflexi_73_18 species=Thermobaculum terrenum genus=Thermobaculum taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC transporter-like protein
sw_5_scaffold_917_17
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16944..17276)
DNA (333bp) protein (111aa)
Cobalt transport protein n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AUT4_RUBXD
cobalt transport protein
Cobalt transport protein {ECO:0000313|EMBL:ABG04844.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;" source="Rubro
sw_5_scaffold_917_18

Not on your lists

comp(17601..18296)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR67 RepID=V4XUY9_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS02367.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
signal transduction histidine kinase LytS
sw_5_scaffold_917_19
RLO_RIF05_58_11, RIF5, Bacteria

Not on your lists

comp(18502..19872)
DNA (1371bp) protein (457aa)
ADP-ribosylglycohydrolase n=1 Tax=Chthonomonas calidirosea T49 RepID=S0EZ91_9BACT
ADP-ribosylglycohydrolase Tax=RIFCSPLOWO2_12_FULL_RIF05_58_11_curated
ADP-ribosylglycohydrolase
sw_5_scaffold_917_20
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(20217..21287)
DNA (1071bp) protein (357aa)
Protein pelota homolog {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00004956}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01853, ECO:0000256|SAAS:SAAS00011872};; TaxID=1132509 species="Archaea; E
Protein pelota homolog n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTW4_9EURY
translation release factor pelota
sw_5_scaffold_917_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21603..22490)
DNA (888bp) protein (296aa)
Branched-chain amino acid aminotransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9F6_9EURY
Branched-chain amino acid aminotransferase {ECO:0000313|EMBL:EMA53744.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococc
class IV aminotransferase
sw_5_scaffold_917_22
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22620..23567)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LZ92_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA37679.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_917_23
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23592..24488)
DNA (897bp) protein (299aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=931277 species="Archaea; Euryar
shikimate dehydrogenase (EC:1.1.1.25)
Shikimate dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MIW5_HALMO
sw_5_scaffold_917_24
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24703..26073
DNA (1371bp) protein (457aa)
Sodium/calcium exchanger membrane subunit n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N736_9EURY
Sodium/calcium exchanger membrane subunit {ECO:0000313|EMBL:EMA53747.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcu
sodium/calcium exchanger membrane subunit
Displaying 24 items

View Taxonomy