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sw_5_scaffold_2109

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Displaying 20 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2109_1
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..282
DNA (282bp) protein (94aa)
Sulfate-transporting ATPase n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY8_9EURY
Branched-chain amino acid ABC transporter ATPase {ECO:0000313|EMBL:AHG04854.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I
sw_5_scaffold_2109_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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279..1025
DNA (747bp) protein (249aa)
ABC transporter related protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IDY7_9EURY
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:AHG04855.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacteriu
livF2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
sw_5_scaffold_2109_trna_1
unknown

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comp(1642..1716)
DNA (75bp)
transferRNA
sw_5_scaffold_2109_3
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(2025..2711)
DNA (687bp) protein (229aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1)
Proteasome subunit beta 2 {ECO:0000255|HAMAP-Rule:MF_02113}; EC=3.4.25.1 {ECO:0000255|HAMAP-Rule:MF_02113};; 20S proteasome beta subunit 2 {ECO:0000255|HAMAP-Rule:MF_02113}; Proteasome core protein Ps
Proteasome subunit beta 2 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=PSB2_HALTV
sw_5_scaffold_2109_4
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2704..3429)
DNA (726bp) protein (242aa)
Proteasome subunit alpha {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552}; EC=3.4.25.1 {ECO:0000256|HAMAP-Rule:MF_00289, ECO:0000256|RuleBase:RU000552};; 20S proteasome alpha subunit {
psmA4; proteasome subunit alpha (EC:3.4.25.1)
Proteasome subunit alpha n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LFA0_HALJP
sw_5_scaffold_2109_5
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3733..5649)
DNA (1917bp) protein (639aa)
coxA; cox-type terminal oxidase subunit I (EC:1.9.3.-)
Cox-type terminal oxidase subunit I {ECO:0000313|EMBL:CCQ37560.1}; EC=1.9.3.- {ECO:0000313|EMBL:CCQ37560.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriac
Cox-type terminal oxidase subunit I n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y4W1_NATM8
sw_5_scaffold_2109_6
unknown

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comp(5829..6035)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_5_scaffold_2109_7
unknown

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comp(6029..6598)
DNA (570bp) protein (190aa)

This feature has no annotations

sw_5_scaffold_2109_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6591..6989)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT36_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37562.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_2109_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7080..8312)
DNA (1233bp) protein (411aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR95_NATM8
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CCQ36751.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
sw_5_scaffold_2109_10
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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8534..9016
DNA (483bp) protein (161aa)
Histidine triad protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CID3_9EURY
Histidine triad protein {ECO:0000313|EMBL:ELZ22122.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
histidine triad (HIT) protein
sw_5_scaffold_2109_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8825..10969)
DNA (2145bp) protein (715aa)
dld_2; D-lactate dehydrogenase / iron-sulfur protein ( glycolate oxidase iron-sulfur subunit) (EC:1.1.1.28)
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR8_NATPD
FAD-dependent oxidoreductase (GlcD/DLD_GlcF/GlpC domain fusion protein) {ECO:0000313|EMBL:CAI48817.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Na
sw_5_scaffold_2109_12
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11203..11769
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YVN6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD53095.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sw_5_scaffold_2109_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(11809..12300)
DNA (492bp) protein (164aa)
folA; dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase {ECO:0000313|EMBL:CAI49552.1}; EC=1.5.1.3 {ECO:0000313|EMBL:CAI49552.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natrono
Dihydrofolate reductase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQP3_NATPD
sw_5_scaffold_2109_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(12297..13043)
DNA (747bp) protein (249aa)
thyA; thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase {ECO:0000313|EMBL:CAI49553.1}; EC=2.1.1.45 {ECO:0000313|EMBL:CAI49553.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomo
Thymidylate synthase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQP2_NATPD
sw_5_scaffold_2109_15
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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13437..13715
DNA (279bp) protein (93aa)
Uncharacterized protein {ECO:0000313|EMBL:EFW93221.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
sw_5_scaffold_2109_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13907..14263
DNA (357bp) protein (119aa)
Cupin 2 barrel domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRU3_NATPD
hypothetical protein
Cupin 2 barrel domain protein {ECO:0000313|EMBL:CAI49149.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_5_scaffold_2109_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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14307..15110
DNA (804bp) protein (268aa)
Creatininase {ECO:0000313|EMBL:CAI49151.1}; EC=3.5.2.10 {ECO:0000313|EMBL:CAI49151.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" s
Creatininase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRU1_NATPD
hypothetical protein
sw_5_scaffold_2109_18
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15131..15295
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPH3_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35934.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_2109_19
unknown

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15406..15960
DNA (555bp) protein (185aa)

This feature has no annotations

Displaying 20 items

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