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sw_5_scaffold_2804

Search features with annotation key words

Displaying 17 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2804_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..849
DNA (849bp) protein (283aa)
Homolog to KaiC-like transcription regulator n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IMU9_NATPD
KaiC-like transcriptional regulator
Uncharacterized protein {ECO:0000313|EMBL:CAI50557.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_2804_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(966..2423)
DNA (1458bp) protein (486aa)
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase subunit PurL {ECO:0000255|HAMAP-Rule:MF_00420}; Short=FGAM synthase {ECO:0000255|HAMAP-Rule:MF_00420};; EC=6.3.5.3 {ECO:0000255|HAMAP-Rule:MF_00420};; Formyl
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PURL_NATPD
sw_5_scaffold_2804_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3495..4172
DNA (678bp) protein (226aa)
PHP domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y074_NATM8
PHP domain protein
PHP domain protein {ECO:0000313|EMBL:CCQ35844.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
sw_5_scaffold_2804_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4172..5245
DNA (1074bp) protein (358aa)
asn; asparagine synthase (glutamine-hydrolyzing) (EC:6.3.5.4)
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:CAI49580.1}; EC=6.3.5.4 {ECO:0000313|EMBL:CAI49580.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQL5_NATPD
sw_5_scaffold_2804_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5250..5642)
DNA (393bp) protein (131aa)
UspA domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQL6_NATPD
stress response protein
UspA domain protein {ECO:0000313|EMBL:CAI49579.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_5_scaffold_2804_6
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5747..6745
DNA (999bp) protein (333aa)
Cbs domain-containing protein n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IRM0_9EURY
Cbs domain-containing protein {ECO:0000313|EMBL:ELZ98109.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-
CBS domain-containing protein
sw_5_scaffold_2804_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6880..7353)
DNA (474bp) protein (158aa)
NUDIX hydrolase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NNY0_HALUD
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ACV10271.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (strain DSM 1
sw_5_scaffold_2804_8
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7425..8402)
DNA (978bp) protein (326aa)
Transcription initiation factor IIB n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KCV5_HALAR
tfb4; transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_5_scaffold_2804_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8600..8896
DNA (297bp) protein (99aa)
aatC; aspartyl-tRNA(Asn) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR7_NATPD
sw_5_scaffold_2804_10
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8874..9311)
DNA (438bp) protein (146aa)
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
Uncharacterized protein id=3779679 bin=GWA2_Methylomirabilis_73_35 species=Zea mays genus=Zea taxon_order=Poales taxon_class=Liliopsida phylum=Streptophyta tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
sw_5_scaffold_2804_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9473..10090
DNA (618bp) protein (206aa)
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000255|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000255|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000255|HAMAP-Rule:MF_00120};; TaxID=348780
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GATA_NATPD
sw_5_scaffold_2804_12
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10231..11004)
DNA (774bp) protein (258aa)
CAAX amino terminal protease family protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FYH9_9EURY
CAAX amino terminal protease family protein {ECO:0000313|EMBL:ELZ65116.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax pr
CAAX amino terminal protease family protein
sw_5_scaffold_2804_13
unknown

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comp(11046..11219)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_5_scaffold_2804_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11222..11743)
DNA (522bp) protein (174aa)
HTH domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR4_NATPD
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CAI48821.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strain
sw_5_scaffold_2804_15
unknown

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comp(11750..11923)
DNA (174bp) protein (58aa)

This feature has no annotations

sw_5_scaffold_2804_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12117..12905)
DNA (789bp) protein (263aa)
fadA_5; enoyl-CoA hydratase I 5 (EC:4.2.1.17)
Enoyl-CoA hydratase {ECO:0000313|EMBL:CAI48822.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAI48822.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomon
Enoyl-CoA hydratase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ISR3_NATPD
sw_5_scaffold_2804_17
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13035..13277)
DNA (243bp) protein (81aa)
ABC transporter related protein n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RZX0_HALTV
ABC transporter
ABC transporter related protein {ECO:0000313|EMBL:ADB62667.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenic
Displaying 17 items

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