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sw_5_scaffold_1933

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_1933_1
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..414)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0C369_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ17098.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JCM 135
sw_5_scaffold_1933_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(603..1307)
DNA (705bp) protein (235aa)
Probable DNA-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN17_NATPD
hypothetical protein
Cro/C1 family transcription regulator {ECO:0000313|EMBL:CAI50489.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas
sw_5_scaffold_1933_3
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1409..2053
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LS91_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA36336.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
hypothetical protein
sw_5_scaffold_1933_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2053..2730
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y3T1_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37186.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_1933_5
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2727..3221
DNA (495bp) protein (165aa)
GCN5-like N-acetyltransferase n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAK9_HALJB
GCN5-like N-acetyltransferase
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:ELY39313.1}; GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ADJ14731.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_5_scaffold_1933_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3207..3788)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN23_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50483.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_1933_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3834..4478)
DNA (645bp) protein (215aa)
TatD-related deoxyribonuclease n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN25_NATPD
hypothetical protein
TatD-related deoxyribonuclease {ECO:0000313|EMBL:CAI50481.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharao
sw_5_scaffold_1933_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4662..5696)
DNA (1035bp) protein (345aa)
nce; Na+/Ca2+-exchanging protein; K07301 inner membrane protein id=24644432 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Ca2+/Na+ antiporter {ECO:0000313|EMBL:ERH08654.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
nce; Na+/Ca2+-exchanging protein
sw_5_scaffold_1933_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5981..6421)
DNA (441bp) protein (147aa)
CHP00288 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN27_NATPD
hypothetical protein
DUF88 domain protein {ECO:0000313|EMBL:CAI50479.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (strai
sw_5_scaffold_1933_10
unknown

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comp(6473..6784)
DNA (312bp) protein (104aa)

This feature has no annotations

sw_5_scaffold_1933_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6892..7542
DNA (651bp) protein (217aa)
gcvT; glycine cleavage system aminomethyltransferase T (EC:2.1.2.10)
Probable aminomethyltransferase {ECO:0000255|HAMAP-Rule:MF_00259}; EC=2.1.2.10 {ECO:0000255|HAMAP-Rule:MF_00259};; Glycine cleavage system T protein {ECO:0000255|HAMAP-Rule:MF_00259}; TaxID=348780 spe
Probable aminomethyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=GCST_NATPD
sw_5_scaffold_1933_12
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7606..8112
DNA (507bp) protein (169aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YRG9_9EURY
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:ELY76830.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrine
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
sw_5_scaffold_1933_13
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8109..8963)
DNA (855bp) protein (285aa)
Zinc transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MF54_9EURY
Zinc transporter {ECO:0000313|EMBL:EMA43973.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 535
zip; zinc transporter
sw_5_scaffold_1933_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9052..9819
DNA (768bp) protein (256aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=348780 species="Archaea;
Putative GTP cyclohydrolase 1 type 2 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN37_NATPD
hypothetical protein
sw_5_scaffold_1933_15
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9987..10445)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E4M1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDS91842.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
sw_5_scaffold_1933_16
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10438..10686)
DNA (249bp) protein (83aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1PD37_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG90006.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_5_scaffold_1933_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11162..11857)
DNA (696bp) protein (232aa)
dehydrogenase/reductase 14 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI50472.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI50472.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN34_NATPD
sw_5_scaffold_1933_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11954..12091
DNA (138bp) protein (46aa)
crtI_1; phytoene dehydrogenase 1 (phytoene desaturase) (EC:1.14.99.-)
Phytoene dehydrogenase (Phytoene desaturase) {ECO:0000313|EMBL:CAI50473.1}; EC=1.14.99.- {ECO:0000313|EMBL:CAI50473.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
Phytoene dehydrogenase (Phytoene desaturase) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IN33_NATPD
Displaying 18 items

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