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sw_5_scaffold_2945

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_2945_1
Natrinema altunense, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1..1200)
DNA (1200bp) protein (400aa)
Transposase n=1 Tax=Natrinema altunense JCM 12890 RepID=L9ZJY0_9EURY
Transposase {ECO:0000313|EMBL:ELY85882.1}; TaxID=1227494 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema altunense JCM 12890.;"
tnp; transposase and inactivated derivatives
sw_5_scaffold_2945_2

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1247..1471
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HR60 RepID=V4YHV6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS10927.1}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
sw_5_scaffold_2945_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1468..1611
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZN8_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35644.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_2945_4
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1838..3433)
DNA (1596bp) protein (532aa)
ATP-dependent RNA helicase/nuclease Hef {ECO:0000313|EMBL:CAI48259.1}; EC=3.6.4.13 {ECO:0000313|EMBL:CAI48259.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobact
ATP-dependent RNA helicase/nuclease Hef n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUC2_NATPD
Hef nuclease
sw_5_scaffold_2945_5
Halorubrum_J07HR59, Halorubrum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3465..4232
DNA (768bp) protein (256aa)
id=24635496 bin=Halorubrum_J07HR59 tax=Halorubrum_J07HR59
id=24635496 bin=Halorubrum_J07HR59 tax=Halorubrum_J07HR59
sw_5_scaffold_2945_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4365..6815
DNA (2451bp) protein (817aa)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y551_NATM8
sw_5_scaffold_2945_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6790..7062
DNA (273bp) protein (91aa)
alaS; alanine--tRNA ligase (EC:6.1.1.7)
Alanine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017576}; EC=6.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00036, ECO:0000256|SAAS:SAAS00017588};; Alanyl-tRNA synthetase {ECO:0000256
Alanine--tRNA ligase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y551_NATM8
Suspect SCG annotation. See neighboring gene [sw_5_scaffold_2945_6].
sw_5_scaffold_2945_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7093..7743)
DNA (651bp) protein (217aa)
ArCOG06342 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT5_NATPD
transducer protein
ArCOG06342 family protein {ECO:0000313|EMBL:CAI48448.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (
sw_5_scaffold_2945_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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8025..9332
DNA (1308bp) protein (436aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT4_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48449.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_2945_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9329..10687
DNA (1359bp) protein (453aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT3_NATPD
hypothetical protein
DUF4393 domain protein {ECO:0000313|EMBL:CAI48450.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (str
sw_5_scaffold_2945_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10803..11093)
DNA (291bp) protein (97aa)
Uncharacterized protein n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3ITT2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48451.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_2945_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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11210..11980
DNA (771bp) protein (257aa)
PHP domain protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA5_NATM8
PHP domain protein
PHP domain protein {ECO:0000313|EMBL:CCQ35544.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
sw_5_scaffold_2945_13
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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12035..12196
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNN5_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35545.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_2945_14
unknown

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12281..12781
DNA (501bp) protein (167aa)

This feature has no annotations

Displaying 14 items

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