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sw_5_scaffold_317

Search features with annotation key words

Displaying 18 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_317_1
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1796)
DNA (1794bp) protein (598aa)
Type II/IV secretion system transmembrane protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XZG7_NATM8
type II/IV secretion system transmembrane protein
Type II/IV secretion system transmembrane protein {ECO:0000313|EMBL:CCQ35556.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
sw_5_scaffold_317_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1803..3431)
DNA (1629bp) protein (543aa)
Type II/IV secretion system ATPase protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNP3_NATM8
type II/IV secretion system ATPase protein
Type II/IV secretion system ATPase protein {ECO:0000313|EMBL:CCQ35555.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
sw_5_scaffold_317_3
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3533..4243)
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R3D9_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ91539.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-1512.;
sw_5_scaffold_317_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4392..4847
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKA7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35554.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_317_5
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4964..5614)
DNA (651bp) protein (217aa)
DNA binding protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N480_9EURY
DNA binding protein {ECO:0000313|EMBL:EMA51914.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
Bacterio-opsin activator HTH domain protein
sw_5_scaffold_317_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5750..6052
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INY9_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50163.2}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_317_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6159..6980
DNA (822bp) protein (274aa)
gch3; GTP cyclohydrolase III (EC:3.5.4.29)
GTP cyclohydrolase III {ECO:0000256|HAMAP-Rule:MF_00608}; EC=3.5.4.29 {ECO:0000256|HAMAP-Rule:MF_00608};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
GTP cyclohydrolase III n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKV7_NATM8
sw_5_scaffold_317_8
uncultured haloarchaeon, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7103..8446
DNA (1344bp) protein (448aa)
ABC-type branched-chain amino acid transport systems, substrate-binding protein n=1 Tax=uncultured haloarchaeon RepID=A5YSQ8_9EURY
ABC-type branched-chain amino acid transport systems, substrate-binding protein {ECO:0000313|EMBL:ABQ76015.1}; TaxID=160804 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
livJ1; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
sw_5_scaffold_317_9
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8697..9953
DNA (1257bp) protein (419aa)
transposase IS605 n=1 Tax=Halorubrum sp. T3 RepID=UPI00035CD8BF
IS1341-type transposase {ECO:0000313|EMBL:EMA69856.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
transposase, IS605 OrfB family, central region
sw_5_scaffold_317_10
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10030..10809)
DNA (780bp) protein (260aa)
ABC transporter n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NRS0_HALBP
branched-chain amino acid ABC transporter ATPase
ABC transporter {ECO:0000313|EMBL:ELY30365.1}; ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:ADQ66857.1}; TaxID=469382 species="Archaea; Euryarchaeota; Haloba
sw_5_scaffold_317_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10806..11711)
DNA (906bp) protein (302aa)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XR21_NATM8
livG1; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
ABC-type transport system ATP-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CCQ36591.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales
sw_5_scaffold_317_12
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11704..13062)
DNA (1359bp) protein (453aa)
ABC-type branched-chain amino acid transport system, permease protein II n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IBR0_9EURY
ABC-type branched-chain amino acid transport system, permease protein II {ECO:0000313|EMBL:ELZ94230.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halof
livM; ABC-type branched-chain amino acid transport system, permease protein II
sw_5_scaffold_317_13
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(13059..14213)
DNA (1155bp) protein (385aa)
Branched-chain amino acid ABC-type transport system, permease component n=1 Tax=halophilic archaeon J07HB67 RepID=U1PQN7_9EURY
Branched-chain amino acid ABC-type transport system, permease component {ECO:0000313|EMBL:ERH12751.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophili
amino acid/amide ABC transporter membrane protein 1, haat family
sw_5_scaffold_317_14
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14412..15527
DNA (1116bp) protein (372aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Phosphoglycerate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PGK_NATPD
sw_5_scaffold_317_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15524..16072
DNA (549bp) protein (183aa)
GNAT family acetyltransferase {ECO:0000313|EMBL:CAI50155.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAI50155.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; N
GNAT family acetyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INZ7_NATPD
protein N-acetyltransferase-like protein
sw_5_scaffold_317_16
unknown

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16745..16885
DNA (141bp) protein (47aa)

This feature has no annotations

sw_5_scaffold_317_17
unknown

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comp(17032..17223)
DNA (192bp) protein (64aa)

This feature has no annotations

sw_5_scaffold_317_18
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(17336..17740)
DNA (405bp) protein (135aa)
PAS sensor histidine kinase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PJ23_9EURY
PAS sensor histidine kinase {ECO:0000313|EMBL:ERH10421.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
histidine kinase
Displaying 18 items

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