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sw_5_scaffold_3196

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Displaying 15 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_3196_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1..468)
DNA (468bp) protein (156aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH09568.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein id=24645351 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
hypothetical protein
sw_5_scaffold_3196_2
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(465..725)
DNA (261bp) protein (87aa)
hypothetical protein id=24645351 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Uncharacterized protein {ECO:0000313|EMBL:ERH09568.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_5_scaffold_3196_3
unknown

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1584..2462
DNA (879bp) protein (293aa)

This feature has no annotations

sw_5_scaffold_3196_4
unknown

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2459..2905
DNA (447bp) protein (149aa)

This feature has no annotations

sw_5_scaffold_3196_5
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2742..3707)
DNA (966bp) protein (322aa)
Glycosyl transferase family 2 n=1 Tax=Halobacterium sp. DL1 RepID=G4IED0_9EURY
Glycosyl transferase {ECO:0000313|EMBL:AHG04794.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
glycosyl transferase family protein
sw_5_scaffold_3196_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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3739..4152
DNA (414bp) protein (138aa)
MATE efflux family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPQ4_NATPD
multidrug efflux protein norM-like protein
MATE efflux family protein {ECO:0000313|EMBL:CAI49894.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
sw_5_scaffold_3196_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4107..4961
DNA (855bp) protein (285aa)
MATE efflux family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPQ4_NATPD
multidrug efflux protein norM-like protein
MATE efflux family protein {ECO:0000313|EMBL:CAI49894.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis
sw_5_scaffold_3196_8
unknown

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comp(5312..5401)
DNA (90bp) protein (30aa)

This feature has no annotations

sw_5_scaffold_3196_9
unknown

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comp(5435..5587)
DNA (153bp) protein (51aa)

This feature has no annotations

sw_5_scaffold_3196_10
unknown

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5609..5845
DNA (237bp) protein (79aa)

This feature has no annotations

sw_5_scaffold_3196_11
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5842..6195
DNA (354bp) protein (118aa)
PemK-like growth inhibitor protein (MazF protein); K07171 mRNA interferase [EC:3.1.-.-] id=24632327 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Growth inhibitor {ECO:0000313|EMBL:ERG94077.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW2.;"
PemK-like growth inhibitor protein (MazF protein)
sw_5_scaffold_3196_12
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6462..6737
DNA (276bp) protein (92aa)
Uncharacterized protein n=2 Tax=Haloarcula RepID=Q5UWN0_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF24485.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_5_scaffold_3196_trna_1
unknown

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comp(7458..7529)
DNA (72bp)
transferRNA
sw_5_scaffold_3196_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7627..7944)
DNA (318bp) protein (106aa)
30S ribosomal protein S10 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS10_NATPD
rps10p; 30S ribosomal protein S10P
30S ribosomal protein S10 {ECO:0000255|HAMAP-Rule:MF_00508}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_5_scaffold_3196_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7948..8928)
DNA (981bp) protein (327aa)
Elongation factor 1-alpha n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLL7_NATM8
tef1a; translation elongation factor aEF-1 alpha subunit
Elongation factor 1-alpha {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004060}; Short=EF-1-alpha {ECO:0000256|HAMAP-Rule:MF_00118};; Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118};
Displaying 15 items

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