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sw_5_scaffold_3645

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Displaying 11 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_3645_1
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3..1031)
DNA (1029bp) protein (343aa)
Transposase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z3H5_9EURY
Transposase {ECO:0000313|EMBL:ELY79733.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
transposase, IS605 OrfB family
sw_5_scaffold_3645_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1303..1704
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y615_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ38005.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_3645_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2071..2823
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUM5_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48155.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_3645_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2879..3769)
DNA (891bp) protein (297aa)
probable sugar dehydrogenase (homolog to aldose sugar dehydrogenase) (EC:1.1.1.-)
Probable sugar dehydrogenase (Homolog to aldose sugar dehydrogenase) {ECO:0000313|EMBL:CCQ37949.1}; EC=1.1.1.- {ECO:0000313|EMBL:CCQ37949.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteri
Probable sugar dehydrogenase (Homolog to aldose sugar dehydrogenase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTX2_NATM8
sw_5_scaffold_3645_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4186..4830)
DNA (645bp) protein (215aa)
30S ribosomal protein S7 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RS7_NATPD
rps7; 30S ribosomal protein S7P
30S ribosomal protein S7 {ECO:0000255|HAMAP-Rule:MF_00480}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaoni
sw_5_scaffold_3645_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(4928..5356)
DNA (429bp) protein (143aa)
30S ribosomal protein S12 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XU20_NATM8
rps12; 30S ribosomal protein S12
30S ribosomal protein S12 {ECO:0000256|HAMAP-Rule:MF_00403, ECO:0000256|RuleBase:RU004490}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.
sw_5_scaffold_3645_7
unknown

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5472..5786
DNA (315bp) protein (105aa)

This feature has no annotations

sw_5_scaffold_3645_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5778..5936)
DNA (159bp) protein (53aa)
Transcription elongation factor NusA n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLL9_NATM8
nusA; transcription elongation factor NusA
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source
sw_5_scaffold_3645_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5875..6111)
DNA (237bp) protein (79aa)
Transcription elongation factor NusA n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN0_NATPD
nusA; transcription elongation factor NusA-like protein
Probable transcription termination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source
sw_5_scaffold_3645_10
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6222..8750)
DNA (2529bp) protein (843aa)
rpoA2; DNA-directed RNA polymerase subunit A (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A'' (Intein-containing) {ECO:0000313|EMBL:CAI48149.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CAI48149.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Haloba
DNA-directed RNA polymerase subunit A'' (Subunit C) (Intein-containing) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN1_NATPD
sw_5_scaffold_3645_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8743..10170)
DNA (1428bp) protein (476aa)
rpoA1; DNA-directed RNA polymerase subunit A' (EC:2.7.7.6)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU004279}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU004279};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
DNA-directed RNA polymerase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUN2_NATPD
Displaying 11 items

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