ggKbase home page

sw_5_scaffold_4402

Search features with annotation key words

Displaying 24 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_4402_1
unknown

Not on your lists

comp(447..779)
DNA (333bp) protein (111aa)

This feature has no annotations

sw_5_scaffold_4402_2
unknown

Not on your lists

1355..1486
DNA (132bp) protein (44aa)

This feature has no annotations

sw_5_scaffold_4402_3
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1470..3191)
DNA (1722bp) protein (574aa)
Transposase, IS605 OrfB family n=2 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SV75_NATMM
Transposase, IS605 OrfB family {ECO:0000313|EMBL:ADD05483.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain AT
transposase, IS605 OrfB family
sw_5_scaffold_4402_4
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3184..3810)
DNA (627bp) protein (209aa)
Resolvase domain protein n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SWA0_NATMM
resolvase
Resolvase domain protein {ECO:0000313|EMBL:ADD05761.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 430
sw_5_scaffold_4402_5
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3998..4345
DNA (348bp) protein (116aa)
ABC-type transport system ATP-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRD1_NATPD
abc28a; ABC-type transport system ATP-binding protein
Multidrug ABC transporter ATPase {ECO:0000313|EMBL:EJN60226.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_5_scaffold_4402_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4342..4827
DNA (486bp) protein (162aa)
ABC-type transport system ATP-binding protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRD1_NATPD
abc28a; ABC-type transport system ATP-binding protein
ABC-type transport system ATP-binding protein {ECO:0000313|EMBL:CAI49312.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_5_scaffold_4402_7
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4824..5618
DNA (795bp) protein (265aa)
ABC-type transport system permease protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XTV0_NATM8
ABC-type transport system permease protein
ABC-type transport system permease protein {ECO:0000313|EMBL:CCQ37924.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
sw_5_scaffold_4402_8
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5667..6377)
DNA (711bp) protein (237aa)
5-formyltetrahydrofolate cyclo-ligase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IRD3_NATPD
Probable COG0212-type thiamine metabolism protein {ECO:0000313|EMBL:CAI49310.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
sw_5_scaffold_4402_9
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6379..6981)
DNA (603bp) protein (201aa)
DUF420 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y5S6_NATM8
DUF420 family protein
DUF420 family protein {ECO:0000313|EMBL:CCQ37925.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (st
sw_5_scaffold_4402_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7220..8326
DNA (1107bp) protein (369aa)
Putative sugar transferase n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CV33_9EURY
Putative sugar transferase {ECO:0000313|EMBL:ELZ26282.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidu
hexosyltransferase 1
sw_5_scaffold_4402_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8351..9448
DNA (1098bp) protein (366aa)
Probable glycosyltransferase, type 1 {ECO:0000313|EMBL:CAI49700.1}; EC=2.4.-.- {ECO:0000313|EMBL:CAI49700.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
Probable glycosyltransferase, type 1 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ96_NATPD
hexosyltransferase 2
sw_5_scaffold_4402_12
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9445..9873)
DNA (429bp) protein (143aa)
ribL; FAD synthetase (EC:2.7.7.2)
FAD synthase {ECO:0000256|HAMAP-Rule:MF_02115, ECO:0000256|SAAS:SAAS00008287}; EC=2.7.7.2 {ECO:0000256|HAMAP-Rule:MF_02115, ECO:0000256|SAAS:SAAS00008290};; FMN adenylyltransferase {ECO:0000256|HAMAP-
FAD synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPV7_NATM8
sw_5_scaffold_4402_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9875..10411)
DNA (537bp) protein (179aa)
Proteasome Rpn11 subunit JAMM motif protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P4J9_HALMD
hypothetical protein
Proteasome Rpn11 subunit JAMM motif protein {ECO:0000313|EMBL:ACV48021.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halom
sw_5_scaffold_4402_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10443..12251
DNA (1809bp) protein (603aa)
Recj-like exonuclease with dnaj-type zn-finger domain protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZHS3_9EURY
hypothetical protein
Recj-like exonuclease with dnaj-type zn-finger domain protein {ECO:0000313|EMBL:EJN60240.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halog
sw_5_scaffold_4402_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12256..13947)
DNA (1692bp) protein (564aa)
Phospholipase D n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK4_NATM8
phospholipase D
Phospholipase D domain protein {ECO:0000313|EMBL:CCQ36058.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolap
sw_5_scaffold_4402_16
unknown

Not on your lists

comp(14063..14449)
DNA (387bp) protein (129aa)

This feature has no annotations

sw_5_scaffold_4402_17
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14526..15803)
DNA (1278bp) protein (426aa)
phycocyanobilin lyase subunit (EC:4.-.-.-)
HEAT-PBS family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ91_NATPD
HEAT-PBS family protein {ECO:0000313|EMBL:CAI49705.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_4402_18
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15979..16659)
DNA (681bp) protein (227aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-alcohol 1-archaetidyltransferase {ECO:0000313|EMBL:CAI49706.1}; EC=2.7.8.- {ECO:0000313|EMBL:CAI49706.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
CDP-alcohol phosphatidyltransferase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQ90_NATPD
sw_5_scaffold_4402_19
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16753..17169
DNA (417bp) protein (139aa)
Halocyanin n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPR4_NATM8
hcp2; halocyanin
Halocyanin {ECO:0000313|EMBL:CCQ36054.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strain DSM 18
sw_5_scaffold_4402_20
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17757..17981)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKQ7_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36333.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_4402_21
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17978..19063)
DNA (1086bp) protein (362aa)
Probable replication complex protein RecJ2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQB5_NATM8
recJ2; probable replication complex protein RecJ2
Probable replication complex protein RecJ2 {ECO:0000313|EMBL:CCQ36332.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
sw_5_scaffold_4402_22
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(19067..19474)
DNA (408bp) protein (136aa)
30S ribosomal protein S15 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQG7_NATM8
rps15; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_5_scaffold_4402_23
unknown

Not on your lists

19839..20255
DNA (417bp) protein (139aa)

This feature has no annotations

sw_5_scaffold_4402_24
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20401..20526
DNA (126bp) protein (42aa)
Ribonuclease P protein component 4 {ECO:0000256|HAMAP-Rule:MF_00757}; Short=RNase P component 4 {ECO:0000256|HAMAP-Rule:MF_00757};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00757};; Rpp21 {ECO:0000256|H
Ribonuclease P protein component 4 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INH2_NATPD
rnp4; ribonuclease P protein component 4
Displaying 24 items

View Taxonomy