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sw_5_scaffold_6312

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Displaying 13 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_6312_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..806)
DNA (804bp) protein (268aa)
Extracellular ligand-binding receptor n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LYY7_9EURY
Extracellular ligand-binding receptor {ECO:0000313|EMBL:EMA38792.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus ha
ABC-type branched-chain amino acid transport system, periplasmic component
sw_5_scaffold_6312_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(1301..1999)
DNA (699bp) protein (233aa)
dehydrogenase/reductase 6 (EC:1.1.1.-)
Probable oxidoreductase (Short-chain dehydrogenase family) {ECO:0000313|EMBL:CAI50174.1}; EC=1.1.1.- {ECO:0000313|EMBL:CAI50174.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobac
Probable oxidoreductase (Short-chain dehydrogenase family) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INX8_NATPD
sw_5_scaffold_6312_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2082..2366
DNA (285bp) protein (95aa)
rpoL; DNA-directed RNA polymerase subunit L (EC:2.7.7.6)
DNA-directed RNA polymerase subunit L {ECO:0000255|HAMAP-Rule:MF_00261}; EC=2.7.7.6 {ECO:0000255|HAMAP-Rule:MF_00261};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Hal
DNA-directed RNA polymerase subunit L n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RPOL_NATPD
sw_5_scaffold_6312_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2457..3260)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKV9_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36598.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_6312_5
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(3325..3825)
DNA (501bp) protein (167aa)
Imidazole glycerol phosphate synthase subunit HisF {ECO:0000256|HAMAP-Rule:MF_01013, ECO:0000313|EMBL:ELZ15649.1}; EC=4.1.3.- {ECO:0000256|HAMAP-Rule:MF_01013, ECO:0000313|EMBL:ELZ15649.1};; IGP synth
Imidazole glycerol phosphate synthase subunit HisF n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DR18_9EURY
Imidazole glycerol phosphate synthase cyclase subunit
sw_5_scaffold_6312_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4143..4727
DNA (585bp) protein (195aa)
Probable metallo-beta-lactamase family hydrolase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y1Q9_NATM8
probable metallo-beta-lactamase family hydrolase
Beta-lactamase domain protein {ECO:0000313|EMBL:CCQ36407.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_5_scaffold_6312_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5074..5886)
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP44_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI50108.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_5_scaffold_6312_8
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5883..6146)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XL71_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37194.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_5_scaffold_6312_9
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6241..6795)
DNA (555bp) protein (185aa)
sod; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natro
Superoxide dismutase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP41_NATPD
sw_5_scaffold_6312_10

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comp(6932..7387)
DNA (456bp) protein (152aa)
Putative nucleic acid-binding protein, contains PIN domain protein n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y8L0_9ARCH
Putative nucleic acid-binding protein, contains PIN domain protein {ECO:0000313|EMBL:ESS09131.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
PilT domain protein
sw_5_scaffold_6312_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7384..7740)
DNA (357bp) protein (119aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1Y0A8_NATM8
hypothetical protein
HTH domain protein {ECO:0000313|EMBL:CCQ35876.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (strai
sw_5_scaffold_6312_12
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7909..9240)
DNA (1332bp) protein (444aa)
Deoxyribodipyrimidine photolyase {ECO:0000313|EMBL:CAI50112.1}; EC=4.1.99.3 {ECO:0000313|EMBL:CAI50112.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
Deoxyribodipyrimidine photolyase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP40_NATPD
phr_1; deoxyribodipyrimidine photolyase
sw_5_scaffold_6312_13
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9398..9817)
DNA (420bp) protein (140aa)
porB; pyruvate--ferredoxin oxidoreductase, beta subunit (EC:1.2.7.1)
Pyruvate--ferredoxin oxidoreductase beta subunit {ECO:0000313|EMBL:CAI50113.1}; EC=1.2.7.1 {ECO:0000313|EMBL:CAI50113.1};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
Pyruvate--ferredoxin oxidoreductase beta subunit n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP39_NATPD
Displaying 13 items

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