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sw_5_scaffold_174

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Displaying items 1-30 of 48 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_174_1
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

438..788
DNA (351bp) protein (117aa)
nucleotide sugar dehydrogenase (EC:1.1.1.22)
Nucleotide sugar dehydrogenase n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DL54_9EURY
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:KKF39988.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
sw_5_scaffold_174_2
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(944..2353)
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TWL5_9EURY
sugar transferase
Uncharacterized protein {ECO:0000313|EMBL:AAG18652.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
sw_5_scaffold_174_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3399..4874)
DNA (1476bp) protein (492aa)
Protein translocase subunit SecY n=2 Tax=Halococcus RepID=M0MI78_9EURY
preprotein translocase, SecY subunit
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=113250
sw_5_scaffold_174_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(4878..5387)
DNA (510bp) protein (170aa)
50S ribosomal protein L15P n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKF2_NATM8
rpl15; 50S ribosomal protein L15
50S ribosomal protein L15 {ECO:0000256|HAMAP-Rule:MF_01341}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolape
sw_5_scaffold_174_5
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5387..5863)
DNA (477bp) protein (159aa)
50S ribosomal protein L30P n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LIM9_9EURY
50S ribosomal protein L30P {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00081760}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sou
rpl30p; 50S ribosomal protein L30P
sw_5_scaffold_174_6
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(5922..6578)
DNA (657bp) protein (219aa)
30S ribosomal protein S5 n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CF15_9EURY
30S ribosomal protein S5 {ECO:0000256|HAMAP-Rule:MF_01307}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JC
30S ribosomal protein S5
sw_5_scaffold_174_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(6575..7090)
DNA (516bp) protein (172aa)
50S ribosomal protein L18P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CIL8_9EURY
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000256|SAAS:SAAS00243986}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;
50S ribosomal protein L18P/L5E
sw_5_scaffold_174_8
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7120..7569)
DNA (450bp) protein (150aa)
50S ribosomal protein L19e n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LFC9_9EURY
50S ribosomal protein L19e {ECO:0000256|HAMAP-Rule:MF_01475, ECO:0000313|EMBL:EMA32292.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sourc
ribosomal protein L19E
sw_5_scaffold_174_9

Not on your lists

comp(7566..8270)
DNA (705bp) protein (235aa)
Ribosomal protein L32e n=1 Tax=halophilic archaeon DL31 RepID=G2MM71_9ARCH
50S ribosomal protein L32e
Ribosomal protein L32e {ECO:0000313|EMBL:AEN06118.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_174_10
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8270..8806)
DNA (537bp) protein (179aa)
50S ribosomal protein L6 n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0C5D9_9EURY
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM
50S ribosomal protein L6P
sw_5_scaffold_174_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(8806..9198)
DNA (393bp) protein (131aa)
30S ribosomal protein S8 n=1 Tax=Halobacterium sp. DL1 RepID=G4IGK7_9EURY
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL
rps8p; 30S ribosomal protein S8P
sw_5_scaffold_174_12
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9201..9401)
DNA (201bp) protein (67aa)
30S ribosomal protein S14 type Z n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AJE6_NATGS
30S ribosomal protein S14
30S ribosomal protein S14 type Z {ECO:0000256|HAMAP-Rule:MF_01364}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronobacterium.;" source="Natronobacteriu
sw_5_scaffold_174_13
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(9398..9982)
DNA (585bp) protein (195aa)
50S ribosomal protein L5 n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D950_HALXS
50S ribosomal protein L5
50S ribosomal protein L5 {ECO:0000256|HAMAP-Rule:MF_01333}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain
sw_5_scaffold_174_14
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9975..10808)
DNA (834bp) protein (278aa)
30S ribosomal protein S4e n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8Y0_9EURY
30S ribosomal protein S4e
30S ribosomal protein S4e {ECO:0000256|HAMAP-Rule:MF_00485}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht
sw_5_scaffold_174_15
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(10805..11173)
DNA (369bp) protein (123aa)
50S ribosomal protein L24P n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W685_9EURY
rpl24p; 50S ribosomal protein L24P
50S ribosomal protein L24P {ECO:0000256|HAMAP-Rule:MF_01326}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harch
sw_5_scaffold_174_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11170..11568)
DNA (399bp) protein (133aa)
50S ribosomal protein L14 n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=RL14_NATPD
rpl14p; 50S ribosomal protein L14P
50S ribosomal protein L14 {ECO:0000255|HAMAP-Rule:MF_01367}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_5_scaffold_174_17
Haloferax mucosum, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(11568..11906)
DNA (339bp) protein (113aa)
30S ribosomal protein S17P n=2 Tax=Haloferax RepID=I3R7Q0_HALMT
rps17p; 30S ribosomal protein S17P
30S ribosomal protein S17P {ECO:0000313|EMBL:ELZ93993.1}; TaxID=662479 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mucosum ATCC BAA-151
sw_5_scaffold_174_18
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11897..12253)
DNA (357bp) protein (119aa)
Ribonuclease P protein component 1 {ECO:0000256|HAMAP-Rule:MF_00754}; Short=RNase P component 1 {ECO:0000256|HAMAP-Rule:MF_00754};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00754};; Rpp29 {ECO:0000256|H
Ribonuclease P protein component 1 n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BEC7_9EURY
RNase P/RNase MRP subunit p29
sw_5_scaffold_174_19
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12250..12468)
DNA (219bp) protein (73aa)
50S ribosomal protein L29P n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CL92_9EURY
50S ribosomal protein L29P {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbad
50S ribosomal protein L29P
sw_5_scaffold_174_20
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(12465..13538)
DNA (1074bp) protein (358aa)
30S ribosomal protein S3 n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W682_9EURY
rps3p; 30S ribosomal protein S3P
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-
sw_5_scaffold_174_21
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(13531..14016)
DNA (486bp) protein (162aa)
50S ribosomal protein L22P n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MWC8_9EURY
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004007}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;
50S ribosomal protein L22
sw_5_scaffold_174_22

Not on your lists


comp(14023..14448)
DNA (426bp) protein (142aa)
ribosomal protein S19/S15 id=24636019 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
30S ribosomal protein S19P {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1412874 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR60.;"
rps19; 30S ribosomal protein S19
sw_5_scaffold_174_23
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(14445..15170)
DNA (726bp) protein (242aa)
50S ribosomal protein L2 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0F545_9EURY
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320, ECO:0000256|SAAS:SAAS00010821}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sou
rpl2p; 50S ribosomal protein L2P
sw_5_scaffold_174_24
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15172..15429)
DNA (258bp) protein (86aa)
50S ribosomal protein L23P n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KFX8_HALAR
50S ribosomal protein L23P {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentine
archaeal ribosomal protein L23
sw_5_scaffold_174_25
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(15426..16181)
DNA (756bp) protein (252aa)
50S ribosomal protein L4 n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CEZ3_9EURY
50S ribosomal protein L4
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola JC
sw_5_scaffold_174_26
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(16184..17185)
DNA (1002bp) protein (334aa)
50S ribosomal protein L3 n=2 Tax=Haladaptatus paucihalophilus RepID=E7QZV6_9EURY
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|SAAS:SAAS00023038}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;
rpl3p; 50S ribosomal protein L3P
sw_5_scaffold_174_27
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17248..18081)
DNA (834bp) protein (278aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LRR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA35788.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_174_trna_1
unknown

Not on your lists

18243..18313
DNA (71bp)
transferRNA
sw_5_scaffold_174_28
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18560..18943
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MUT9_HALMO
Uncharacterized protein {ECO:0000313|EMBL:EMA49078.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 1307
hypothetical protein
sw_5_scaffold_174_29
unknown

Not on your lists

comp(19113..19973)
DNA (861bp) protein (287aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

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