ggKbase home page

sw_5_scaffold_30

Search features with annotation key words

Displaying items 1-30 of 73 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_30_1
unknown

Not on your lists

2..79
DNA (78bp) protein (26aa)

This feature has no annotations

sw_5_scaffold_30_2
unknown

Not on your lists

comp(179..421)
DNA (243bp) protein (81aa)

This feature has no annotations

sw_5_scaffold_30_3
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(584..1645)
DNA (1062bp) protein (354aa)
50S ribosomal protein L10 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RQS3_HALTV
50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00280}; Acidic ribosomal protein P0 homolog {ECO:0000256|HAMAP-Rule:MF_00280}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialb
sw_5_scaffold_30_4
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(1647..2285)
DNA (639bp) protein (213aa)
50S ribosomal protein L1 n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QRY1_9EURY
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318, ECO:0000256|SAAS:SAAS00010815}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;
rpl1P; 50S ribosomal protein L1P
sw_5_scaffold_30_5
Halovivax ruber, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2655..3143)
DNA (489bp) protein (163aa)
50S ribosomal protein L11 n=1 Tax=Halovivax ruber (strain DSM 18193 / JCM 13892 / XH-70) RepID=L0I8T5_HALRX
ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736}; TaxID=797302 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax ruber (strain DSM 1
sw_5_scaffold_30_6
unknown

Not on your lists

comp(3218..3436)
DNA (219bp) protein (73aa)

This feature has no annotations

sw_5_scaffold_30_7
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3544..5280
DNA (1737bp) protein (579aa)
Thiamine pyrophosphate protein central region n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LHU7_9EURY
Thiamine pyrophosphate protein central region {ECO:0000313|EMBL:EMA31989.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma
thiamine pyrophosphate protein central region
sw_5_scaffold_30_8
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5300..6265)
DNA (966bp) protein (322aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FLB1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ59374.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein
sw_5_scaffold_30_9
unknown

Not on your lists

6542..6769
DNA (228bp) protein (76aa)

This feature has no annotations

sw_5_scaffold_30_10
Haloferax sp. ATCC BAA-644, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6962..7933
DNA (972bp) protein (324aa)
UDP-glucose 4-epimerase n=3 Tax=Haloferax RepID=M0FGY2_9EURY
UDP-glucose 4-epimerase {ECO:0000313|EMBL:ELZ72103.1}; TaxID=1227462 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. ATCC BAA-644.;"
galE6; UDP-glucose 4-epimerase
sw_5_scaffold_30_11
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8246..9088)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XZJ9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY67279.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.;"
hypothetical protein
sw_5_scaffold_30_12
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9158..10369)
DNA (1212bp) protein (404aa)
Phosphate transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MJA2_9EURY
Phosphate transporter {ECO:0000313|EMBL:EMA44495.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DS
phosphate transporter
sw_5_scaffold_30_13
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10859..11092
DNA (234bp) protein (78aa)
Uncharacterized protein {ECO:0000313|EMBL:ERH13811.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein id=24653318 bin=uncultivated_archaeon_J07ABHX67 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX67
hypothetical protein
sw_5_scaffold_30_14
unknown

Not on your lists

comp(11095..11409)
DNA (315bp) protein (105aa)

This feature has no annotations

sw_5_scaffold_30_15
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11361..12107)
DNA (747bp) protein (249aa)
GCN5-related N-acetyltransferase n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BRG0_9EURY
acetyltransferase
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ELZ13586.1}; TaxID=1227490 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halovivax.;" source="Halovivax asiaticus JCM 1
sw_5_scaffold_30_16
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12673..12819)
DNA (147bp) protein (49aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IB36_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04251.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_5_scaffold_30_17
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12855..13811)
DNA (957bp) protein (319aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HNN7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ84719.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-1513
hypothetical protein
sw_5_scaffold_30_18
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13873..14946)
DNA (1074bp) protein (358aa)
Aminoglycoside phosphotransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CYE9_9EURY
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ELZ27452.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carls
aminoglycoside phosphotransferase
sw_5_scaffold_30_19
Halorubrum tebenquichense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14989..16635)
DNA (1647bp) protein (549aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485}; Short=ATase {ECO:0000256|HAMAP-Rule:MF_01931, ECO:0000256|PIRNR:PIRNR000485};; EC=2.4.2.14 {ECO:0000256
Amidophosphoribosyltransferase n=1 Tax=Halorubrum tebenquichense DSM 14210 RepID=M0DJ97_9EURY
sw_5_scaffold_30_20
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16632..16883)
DNA (252bp) protein (84aa)
Like-Sm ribonucleoprotein core n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LWP4_9EURY
Sm ribonucleoprotein-like protein
Sm ribonucleoprotein-like protein {ECO:0000313|EMBL:ELZ19179.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina
sw_5_scaffold_30_21
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16939..17988)
DNA (1050bp) protein (350aa)
peptidase M42 family protein; K01179 endoglucanase [EC:3.2.1.4] id=24615400 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Peptidase {ECO:0000313|EMBL:ESP87154.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrellens
endoglucanase
sw_5_scaffold_30_22
unknown

Not on your lists

18074..18379
DNA (306bp) protein (102aa)

This feature has no annotations

sw_5_scaffold_30_23
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18432..19466
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9WD95_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY47241.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulfidifaciens J
hypothetical protein
sw_5_scaffold_30_24
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20043..20780
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LED2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA30794.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
hypothetical protein
sw_5_scaffold_30_25
Natrialba asiatica, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20789..21721)
DNA (933bp) protein (311aa)
5,10-methylene-tetrahydrofolate dehydrogenase/methenyl tetrahydrofolate cyclohydrolase (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LB32_9EURY
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=29540 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba asiatica (strain ATC
sw_5_scaffold_30_26
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21747..22310)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VXT3_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN01071.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_5_scaffold_30_27
unknown

Not on your lists

22397..22663
DNA (267bp) protein (89aa)

This feature has no annotations

sw_5_scaffold_30_28
Haloarcula sinaiiensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22663..23475
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Haloarcula sinaiiensis ATCC 33800 RepID=M0K2K4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EMA14364.1}; TaxID=662476 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sinaiiensis ATCC
sw_5_scaffold_30_trna_3
unknown

Not on your lists

comp(23759..23829)
DNA (71bp)
transferRNA
sw_5_scaffold_30_29
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23912..24841)
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=G0HSW6_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM58492.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
Displaying items 1-30 of 73 in total

View Taxonomy