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sw_5_scaffold_424

Search features with annotation key words

Displaying items 1-30 of 54 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_424_1
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1..1287
DNA (1287bp) protein (429aa)
Glycine dehydrogenase subunit 1 {ECO:0000313|EMBL:ELY57681.1}; EC=1.4.4.2 {ECO:0000313|EMBL:ELY57681.1};; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natr
glycine cleavage system protein P (EC:1.4.4.2)
Glycine dehydrogenase subunit 1 n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X8C1_9EURY
sw_5_scaffold_424_2
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1284..2957
DNA (1674bp) protein (558aa)
Glycine dehydrogenase subunit 2 {ECO:0000313|EMBL:ELY57680.1}; EC=1.4.4.2 {ECO:0000313|EMBL:ELY57680.1};; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natr
gcvP2; glycine dehydrogenase subunit 2 (EC:1.4.4.2)
Glycine dehydrogenase subunit 2 n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9X7H7_9EURY
sw_5_scaffold_424_3
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3213..4289
DNA (1077bp) protein (359aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI0003823635
Phosphonate ABC transporter periplasmic phosphonate-binding protein {ECO:0000313|EMBL:ELZ37109.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubru
phosphonate ABC transporter periplasmic phosphonate-binding protein
sw_5_scaffold_424_4
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4323..5180
DNA (858bp) protein (286aa)
phosphonate ABC transporter ATPase (EC:3.6.3.28)
Phosphonates import ATP-binding protein PhnC {ECO:0000256|HAMAP-Rule:MF_01713}; EC=3.6.3.28 {ECO:0000256|HAMAP-Rule:MF_01713};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales
Phosphonate ABC transporter, ATPase subunit n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D9Y8_HALXS
sw_5_scaffold_424_5
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5177..6205
DNA (1029bp) protein (343aa)
Phosphonate ABC transporter inner membrane subunit n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DR07_9EURY
Phosphonate ABC transporter inner membrane subunit {ECO:0000313|EMBL:ELZ37107.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halo
phosphonate ABC transporter inner membrane subunit
sw_5_scaffold_424_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6391..6984)
DNA (594bp) protein (198aa)
Uracil-DNA glycosylase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W738_9EURY
uracil-DNA glycosylase
Uracil-DNA glycosylase {ECO:0000313|EMBL:AGN00708.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;
sw_5_scaffold_424_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(7048..7611)
DNA (564bp) protein (188aa)
UPF0215 protein HalDL1DRAFT_0808 n=1 Tax=Halobacterium sp. DL1 RepID=G4IEC5_9EURY
UPF0215 protein HALDL1_15270 {ECO:0000256|HAMAP-Rule:MF_00582}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp
hypothetical protein
sw_5_scaffold_424_8
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7635..7832)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D3K7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29433.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_424_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7884..8549
DNA (666bp) protein (222aa)
Flavoprotein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D006_9EURY
Flavoprotein {ECO:0000313|EMBL:ELZ27469.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
fprA; flavoprotein
sw_5_scaffold_424_10

Not on your lists

comp(8551..8958)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XCR9_9ARCH
Probable ribosome biogenesis protein A07HB70_02214 {ECO:0000256|HAMAP-Rule:MF_01116}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_5_scaffold_424_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9435..11174
DNA (1740bp) protein (580aa)
histone acetyltransferase (EC:2.3.1.48)
Histone acetyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CQE3_9EURY
Histone acetyltransferase {ECO:0000313|EMBL:ELZ25475.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
sw_5_scaffold_424_12
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11707..13011)
DNA (1305bp) protein (435aa)
PcrB family protein n=1 Tax=Halogranum salarium B-1 RepID=J3JHX9_9EURY
PcrB family protein {ECO:0000313|EMBL:EJN61389.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
PcrB family protein
sw_5_scaffold_424_13

Not on your lists

13102..14397
DNA (1296bp) protein (432aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MGU9_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN06039.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_424_14
unknown

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comp(14716..15501)
DNA (786bp) protein (262aa)

This feature has no annotations

sw_5_scaffold_424_15
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16372..19125)
DNA (2754bp) protein (918aa)
ATP-dependent helicase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0L7Z6_9EURY
ATP-dependent helicase {ECO:0000313|EMBL:EMA28584.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
ATP-dependent helicase
sw_5_scaffold_424_16
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19262..20062
DNA (801bp) protein (267aa)
Beta-lactamase domain-containing protein n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3L0_9EURY
Beta-lactamase domain-containing protein {ECO:0000313|EMBL:EMA52456.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus
metal-dependent hydrolase
sw_5_scaffold_424_17

Not on your lists

20131..21642
DNA (1512bp) protein (504aa)
Lignostilbene-alpha,beta-dioxygenase related enzyme n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y5M3_9ARCH
Lignostilbene-alpha,beta-dioxygenase related enzyme {ECO:0000313|EMBL:ESS06342.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
lignostilbene-alpha,beta-dioxygenase-like enzyme
sw_5_scaffold_424_18
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21647..22387)
DNA (741bp) protein (247aa)
isopentenyl phosphate kinase (EC:2.7.4.-)
Isopentenyl phosphate kinase {ECO:0000256|PIRNR:PIRNR016496}; Short=IPK {ECO:0000256|PIRNR:PIRNR016496};; EC=2.7.4.26 {ECO:0000256|PIRNR:PIRNR016496};; TaxID=469382 species="Archaea; Euryarchaeota; Ha
Isopentenyl phosphate kinase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NR83_HALBP
sw_5_scaffold_424_19
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22384..23157)
DNA (774bp) protein (258aa)
Mevalonate kinase {ECO:0000256|HAMAP-Rule:MF_00217}; Short=MK {ECO:0000256|HAMAP-Rule:MF_00217};; Short=MVK {ECO:0000256|HAMAP-Rule:MF_00217};; EC=2.7.1.36 {ECO:0000256|HAMAP-Rule:MF_00217};; TaxID=93
Mevalonate kinase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0M7C4_HALMO
mevalonate kinase
sw_5_scaffold_424_20
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23967..24329
DNA (363bp) protein (121aa)
hypothetical protein id=24628925 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG91668.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_5_scaffold_424_21
unknown

Not on your lists

24299..24505
DNA (207bp) protein (69aa)

This feature has no annotations

sw_5_scaffold_424_22

Not on your lists

24911..25537
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MQ54_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN07823.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_424_23
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(25400..26473)
DNA (1074bp) protein (358aa)
30S ribosomal protein S2 n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0MAT2_9EURY
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291, ECO:0000256|SAAS:SAAS00012212}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" sourc
30S ribosomal protein S2
sw_5_scaffold_424_24
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26470..27666)
DNA (1197bp) protein (399aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:EMA41743.1}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318, ECO:0000313|EMBL:EMA41743.1};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMA
Enolase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M8R9_9EURY
phosphopyruvate hydratase
sw_5_scaffold_424_25
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27663..27842)
DNA (180bp) protein (60aa)
rpoK; DNA-directed RNA polymerase subunit K (EC:2.7.7.6)
DNA-directed RNA polymerase subunit K {ECO:0000256|HAMAP-Rule:MF_00192}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00192};; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Halof
DNA-directed RNA polymerase subunit K n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R8A1_HALMT
sw_5_scaffold_424_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(27839..28030)
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase subunit N {ECO:0000256|HAMAP-Rule:MF_00250}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00250};; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Ha
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N7B6_9EURY
sw_5_scaffold_424_27

Not on your lists


comp(28033..28428)
DNA (396bp) protein (132aa)
SSU ribosomal protein S9P n=1 Tax=uncultured archaeon A07HB70 RepID=V4XDF2_9ARCH
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
archaeal ribosomal protein S9P
sw_5_scaffold_424_28

Not on your lists


comp(28422..28859)
DNA (438bp) protein (146aa)
50S ribosomal protein L13 n=1 Tax=halophilic archaeon DL31 RepID=G2MJ53_9ARCH
50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_5_scaffold_424_29
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(28856..29206)
DNA (351bp) protein (117aa)
50S ribosomal protein L18e n=3 Tax=Natrinema RepID=I7BJ47_NATSJ
ribosomal protein L15
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329, ECO:0000256|RuleBase:RU000573}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" sour
sw_5_scaffold_424_trna_2
unknown

Not on your lists

comp(29450..29534)
DNA (85bp)
transferRNA
Displaying items 1-30 of 54 in total

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