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sw_5_scaffold_60

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_60_1
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..291
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M2X2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA39753.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
hypothetical protein
sw_5_scaffold_60_2
halophilic archaeon J07HX5, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

330..1628
DNA (1299bp) protein (433aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
S-adenosylhomocysteine hydrolase n=1 Tax=halophilic archaeon J07HX5 RepID=U1P3P6_9EURY
S-adenosylhomocysteine hydrolase {ECO:0000313|EMBL:ERG88127.1}; TaxID=1325472 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX5.;"
sw_5_scaffold_60_3
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1630..2415)
DNA (786bp) protein (262aa)
Cobalt transport protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M0M2_9EURY
Cobalt transport protein {ECO:0000313|EMBL:EMA37925.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 10
cobalt transport protein
sw_5_scaffold_60_4
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2412..4391)
DNA (1980bp) protein (660aa)
ABC transporter n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MGR3_9EURY
ABC transporter {ECO:0000313|EMBL:EMA43600.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus DSM 5350
ABC transporter-like protein
sw_5_scaffold_60_5
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4438..5322)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MFZ3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA43599.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_5_scaffold_60_6
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5698..6729
DNA (1032bp) protein (344aa)
uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
Uroporphyrinogen decarboxylase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NV72_HALUD
sw_5_scaffold_60_7
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6726..8069)
DNA (1344bp) protein (448aa)
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase {ECO:0000313|EMBL:ADB63157.1}; EC=1.3.3.4 {ECO:0000313|EMBL:ADB63157.1};; Flags: Precursor;; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natria
Protoporphyrinogen oxidase n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S1B0_HALTV
sw_5_scaffold_60_8
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8074..9183)
DNA (1110bp) protein (370aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323};; Heme synthase {ECO:0000256|HAMAP-Rule:MF_00323}; Protoheme ferro-lyase {ECO:0000256|HAMAP-Rule:MF_0032
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QPI3_9EURY
sw_5_scaffold_60_9
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9336..10034
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IG04_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03482.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_5_scaffold_60_10
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10203..11429)
DNA (1227bp) protein (409aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113, ECO:0000313|EMBL:EMA32446.1}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=358396 species="
DNA polymerase IV n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LFX9_9EURY
DNA polymerase IV
sw_5_scaffold_60_11
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11652..12524)
DNA (873bp) protein (291aa)
NAD-dependent epimerase/dehydratase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKT5_NATM8
NAD-dependent epimerase/dehydratase
GalE family epimerase/dehydratase {ECO:0000313|EMBL:CCQ36476.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moo
sw_5_scaffold_60_12
unknown

Not on your lists

comp(12561..12851)
DNA (291bp) protein (97aa)

This feature has no annotations

sw_5_scaffold_60_13
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12965..13333)
DNA (369bp) protein (123aa)
Putative fluoride ion transporter CrcB n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYJ3_HALMD
CrcB protein
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
sw_5_scaffold_60_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13330..13782)
DNA (453bp) protein (151aa)
camphor resistance protein crcb; K06199 CrcB protein id=24616462 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Putative fluoride ion transporter CrcB {ECO:0000256|HAMAP-Rule:MF_00454}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source
camphor resistance protein crcb
sw_5_scaffold_60_15
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13895..14215
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BQC2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ13110.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_5_scaffold_60_16
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14254..17844
DNA (3591bp) protein (1197aa)
Chromosome partition protein Smc n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MM32_9EURY
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sac
smc; chromosome segregation protein Smc
sw_5_scaffold_60_17
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17837..18682
DNA (846bp) protein (282aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NFB5_9EURY
Chromosome segregation and condensation protein ScpA {ECO:0000313|EMBL:EMA55385.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source
hypothetical protein
sw_5_scaffold_60_18
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18935..19855
DNA (921bp) protein (307aa)
Phenazine biosynthesis protein phzf family n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0CWZ5_9EURY
Phenazine biosynthesis protein phzf family {ECO:0000313|EMBL:ELZ27153.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeo
phenazine biosynthesis protein phzf family
sw_5_scaffold_60_19
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19941..22364
DNA (2424bp) protein (808aa)
Phosphoenolpyruvate synthase {ECO:0000313|EMBL:EMA41768.1}; EC=2.7.9.2 {ECO:0000313|EMBL:EMA41768.1};; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobif
Phosphoenolpyruvate synthase n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0M8U5_9EURY
phosphoenolpyruvate synthase
sw_5_scaffold_60_20
unknown

Not on your lists

23036..23941
DNA (906bp) protein (302aa)

This feature has no annotations

sw_5_scaffold_60_21
unknown

Not on your lists

24049..24243
DNA (195bp) protein (65aa)

This feature has no annotations

sw_5_scaffold_60_22
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


24577..26739
DNA (2163bp) protein (721aa)
metG; methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=24614639 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098};; Methionyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00098}; TaxID=1324957 species="Archaea;
methionyl-tRNA synthetase
sw_5_scaffold_60_23
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26806..26943)
DNA (138bp) protein (46aa)
dihydropteroate synthase (EC:2.5.1.15)
Dihydropteroate synthase n=2 Tax=Halorubrum distributum RepID=M0EW17_9EURY
Dihydropteroate synthase {ECO:0000313|EMBL:EMA58624.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;
sw_5_scaffold_60_24
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(27025..28200)
DNA (1176bp) protein (392aa)
Putative circadian clock protein, KaiC n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QNN9_9EURY
Putative circadian clock protein, KaiC {ECO:0000313|EMBL:EFW94156.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatu
circadian clock protein KaiC
sw_5_scaffold_60_25
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28355..29296
DNA (942bp) protein (314aa)
GTP cyclohydrolase MptA {ECO:0000256|HAMAP-Rule:MF_01527}; EC=3.5.4.39 {ECO:0000256|HAMAP-Rule:MF_01527};; GTP cyclohydrolase IV {ECO:0000256|HAMAP-Rule:MF_01527}; TaxID=1227497 species="Archaea; Eury
GTP cyclohydrolase MptA n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XTC0_9EURY
hypothetical protein
sw_5_scaffold_60_26
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

29380..29922
DNA (543bp) protein (181aa)
Phage T7 F exclusion suppressor FxsA n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NMK6_9EURY
Phage T7 F exclusion suppressor FxsA {ECO:0000313|EMBL:AKH98400.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanae
fxsA; FxsA
sw_5_scaffold_60_trna_1
unknown

Not on your lists

29974..30047
DNA (74bp)
transferRNA
Displaying 27 items

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