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sw_5_scaffold_77

Search features with annotation key words

Displaying items 1-30 of 67 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_77_1
unknown

Not on your lists

2..73
DNA (72bp) protein (24aa)

This feature has no annotations

sw_5_scaffold_77_2
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(445..2004)
DNA (1560bp) protein (520aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Halobacterium sp. DL1 RepID=G4IBD7_9EURY
sw_5_scaffold_77_3
Halovivax asiaticus, Halovivax, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(2004..3536)
DNA (1533bp) protein (511aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00282}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00282, ECO:0000313|EMBL:ELZ09328.1};; Phenylalanyl-tRNA synthetase alpha subunit {ECO
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Halovivax asiaticus JCM 14624 RepID=M0BG99_9EURY
phenylalanyl-tRNA synthetase, alpha subunit
sw_5_scaffold_77_4
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3854..5218
DNA (1365bp) protein (455aa)
NADH:flavin oxidoreductase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XTZ0_9EURY
NADH:flavin oxidoreductase
NADH:flavin oxidoreductase {ECO:0000313|EMBL:ELY65255.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 10478.
sw_5_scaffold_77_5
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5330..6442)
DNA (1113bp) protein (371aa)
Peptidase M29 aminopeptidase II n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NTX0_9EURY
Peptidase M29 aminopeptidase II {ECO:0000313|EMBL:EMA60060.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM
leucyl aminopeptidase (aminopeptidase t)
sw_5_scaffold_77_6
Halobiforma lacisalsi, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6493..6951)
DNA (459bp) protein (153aa)
Thioesterase n=1 Tax=Halobiforma lacisalsi AJ5 RepID=M0LPU3_9EURY
Thioesterase {ECO:0000313|EMBL:EMA34050.1}; TaxID=358396 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma lacisalsi AJ5.;"
thioesterase superfamily protein
sw_5_scaffold_77_7
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7413..11501)
DNA (4089bp) protein (1363aa)
DNA polymerase II large subunit {ECO:0000256|HAMAP-Rule:MF_00324}; Short=Pol II {ECO:0000256|HAMAP-Rule:MF_00324};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_00324};; TaxID=1261545 species="Archaea; Eurya
DNA polymerase II large subunit (EC:2.7.7.7)
DNA polymerase II large subunit n=2 Tax=Halarchaeum acidiphilum RepID=U2YCD7_9EURY
sw_5_scaffold_77_8
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11498..11920)
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0NZM8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA63286.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_5_scaffold_77_9
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12984..13961
DNA (978bp) protein (326aa)
Transposase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPB8_HALBP
transposase
Transposase {ECO:0000313|EMBL:ADQ66473.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain ATC
sw_5_scaffold_77_10
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14056..16029
DNA (1974bp) protein (658aa)
ABC-type dipeptide/oligopeptide/nickel transport system, substrate-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CV11_9EURY
ABC-type dipeptide/oligopeptide/nickel transport system, substrate-binding protein {ECO:0000313|EMBL:ELZ25734.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacte
dppA; ABC-type dipeptide/oligopeptide/nickel transport systems, substrate-binding protein
sw_5_scaffold_77_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16170..17237
DNA (1068bp) protein (356aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease I n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR44_9EURY
ABC-type dipeptide/oligopeptide/nickel transport system, permease I {ECO:0000313|EMBL:ELZ25735.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosi
dppB; ABC-type dipeptide/oligopeptide/nickel transport system, permease I
sw_5_scaffold_77_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17240..18952
DNA (1713bp) protein (571aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR83_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:ELZ25736.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimple
dppC1; dipeptide/oligopeptide/nickel ABC transporter permease
sw_5_scaffold_77_13
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18953..20065
DNA (1113bp) protein (371aa)
ABC-type transport system ATP-binding protein (Probable substrate dipeptides/oligopeptides) n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QP28_9EURY
ABC-type transport system ATP-binding protein (Probable substrate dipeptides/oligopeptides) {ECO:0000313|EMBL:EFW93681.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales;
oppD1; oligopeptide ABC transporter ATPase
sw_5_scaffold_77_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20062..21447
DNA (1386bp) protein (462aa)
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CSV6_9EURY
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ25738.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimp
dppF1; dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein
sw_5_scaffold_77_15
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21440..21973
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CV16_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25739.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_77_16
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22034..22576
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CR50_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ25740.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_5_scaffold_77_17
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22721..23578
DNA (858bp) protein (286aa)
CBS domain-containing protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZGR8_9EURY
CBS domain-containing protein {ECO:0000313|EMBL:EJN59890.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_5_scaffold_77_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


23571..25406
DNA (1836bp) protein (612aa)
Glycyl-tRNA ligase {ECO:0000313|EMBL:ESP89535.1}; EC=6.1.1.14 {ECO:0000313|EMBL:ESP89535.1};; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus
Glycyl-tRNA ligase n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HFR3_9EURY
glycyl-tRNA synthetase
sw_5_scaffold_77_19
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25403..26020
DNA (618bp) protein (206aa)
Dolichol kinase-like protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LRA3_HALJP
Dolichol kinase-like protein {ECO:0000313|EMBL:EMA34575.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DS
dolichol kinase-like protein
sw_5_scaffold_77_20
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26102..28453
DNA (2352bp) protein (784aa)
Hef nuclease n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BZ18_9EURY
Hef nuclease {ECO:0000313|EMBL:ELZ16261.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans DSM 11522.;"
ERCC4-like helicase
sw_5_scaffold_77_21
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28520..29155)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DBP9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ32218.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_5_scaffold_77_22
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29272..30456)
DNA (1185bp) protein (395aa)
Proteasome-activating nucleotidase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W0N1_9EURY
proteasome-activating nucleotidase
Proteasome-activating nucleotidase {ECO:0000256|HAMAP-Rule:MF_00553}; Short=PAN {ECO:0000256|HAMAP-Rule:MF_00553};; Proteasomal ATPase {ECO:0000256|HAMAP-Rule:MF_00553}; Proteasome regulatory ATPase {
sw_5_scaffold_77_23
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(30796..31665)
DNA (870bp) protein (290aa)
sucD; succinate--CoA ligase (ADP-forming), alpha subunit (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriale
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INN4_NATPD
sw_5_scaffold_77_24
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(31662..32864)
DNA (1203bp) protein (401aa)
succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=2 Tax=Haloterrigena RepID=D2RT65_HALTV
sw_5_scaffold_77_25
unknown

Not on your lists

33294..33641
DNA (348bp) protein (116aa)

This feature has no annotations

sw_5_scaffold_77_26
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(33762..34424)
DNA (663bp) protein (221aa)
NADPH-dependent F420 reductase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N0A2_9EURY
NADPH-dependent F420 reductase {ECO:0000313|EMBL:EMA50978.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodin
NADPH-dependent F420 reductase
sw_5_scaffold_77_27
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(34469..35137)
DNA (669bp) protein (223aa)
uridine kinase (EC:2.7.1.48)
Uridine kinase {ECO:0000256|RuleBase:RU003825}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825};; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;"
Uridine kinase n=1 Tax=Natronococcus occultus SP4 RepID=L0JW23_9EURY
sw_5_scaffold_77_28
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

35246..35695
DNA (450bp) protein (150aa)
Heat shock protein Hsp20 n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LFN3_9EURY
Heat shock protein Hsp20 {ECO:0000313|EMBL:EMA31244.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM
heat shock protein Hsp20
sw_5_scaffold_77_29
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


36113..39025
DNA (2913bp) protein (971aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049, ECO:0000313|EMBL:ELY87464.1};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=1230
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=L9ZM81_9EURY
sw_5_scaffold_77_30
unknown

Not on your lists

comp(39320..39676)
DNA (357bp) protein (119aa)

This feature has no annotations

Displaying items 1-30 of 67 in total

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