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sw_5_scaffold_93

Search features with annotation key words

Displaying items 1-30 of 117 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_5_scaffold_93_1
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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58..1266
DNA (1209bp) protein (403aa)
Peptidase M50 n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2RUC1_HALTV
peptidase M50
Peptidase M50 {ECO:0000313|EMBL:ADB59190.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica (strain ATCC 511
sw_5_scaffold_93_2
unknown

Not on your lists

2019..2168
DNA (150bp) protein (50aa)

This feature has no annotations

sw_5_scaffold_93_3
Homo sapiens, Homo, Primates, Mammalia, Chordata, Metazoa

Not on your lists

comp(2596..5412)
DNA (2817bp) protein (939aa)
Alternative protein DSPP n=1 Tax=Homo sapiens RepID=L8E9K9_HUMAN
Alternative protein DSPP {ECO:0000313|EMBL:CCQ43426.1}; TaxID=9606 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhin
large exoprotein
sw_5_scaffold_93_4
unknown

Not on your lists

5557..5946
DNA (390bp) protein (130aa)

This feature has no annotations

sw_5_scaffold_93_5
unknown

Not on your lists

6272..6670
DNA (399bp) protein (133aa)

This feature has no annotations

sw_5_scaffold_93_trna_2
unknown

Not on your lists

comp(7751..7823)
DNA (73bp)
transferRNA
sw_5_scaffold_93_6
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8014..8469
DNA (456bp) protein (152aa)
Superfamily II helicase-like protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QP01_9EURY
Superfamily II helicase-like protein {ECO:0000313|EMBL:EFW93654.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
helicase
sw_5_scaffold_93_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8488..8898)
DNA (411bp) protein (137aa)
Uncharacterized protein n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0M5C1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA40593.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 100
CopG family transcripitonal regulator
sw_5_scaffold_93_8
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9037..9642)
DNA (606bp) protein (202aa)
Uncharacterized protein conserved in archaea n=1 Tax=uncultured archaeon A07HR67 RepID=V4XX24_9ARCH
rpa-associated protein
Rpa-associated protein {ECO:0000313|EMBL:AHF98494.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;
sw_5_scaffold_93_9
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9642..10577)
DNA (936bp) protein (312aa)
Nucleic acid binding OB-fold tRNA/helicase-type n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D565_HALXS
OB-fold tRNA/helicase-type nucleic acid binding protein
Nucleic acid binding OB-fold tRNA/helicase-type {ECO:0000313|EMBL:AEH36417.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger x
sw_5_scaffold_93_10
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10701..12485
DNA (1785bp) protein (595aa)
Multi-sensor signal transduction histidine kinase {ECO:0000313|EMBL:CDK39727.1}; EC=2.7.13.3 {ECO:0000313|EMBL:CDK39727.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales;
PAS/PAC sensor hybrid histidine kinase (EC:2.7.13.3)
Multi-sensor signal transduction histidine kinase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DU72_9EURY
sw_5_scaffold_93_11
Haloferax sp. BAB2207, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12563..12835
DNA (273bp) protein (91aa)
Uncharacterized protein n=3 Tax=Haloferax RepID=L5NXA7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELK54763.1}; TaxID=1243180 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. BAB2207.;"
hypothetical protein
sw_5_scaffold_93_12
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12864..13961
DNA (1098bp) protein (366aa)
Mannose-1-phosphate guanylyltransferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KHE0_HALAR
Mannose-1-phosphate guanylyltransferase {ECO:0000313|EMBL:EMA20772.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula
mannose-1-phosphate guanyltransferase
sw_5_scaffold_93_13
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14560..14688)
DNA (129bp) protein (43aa)
KEOPS complex Cgi121-like subunit n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W8B4_9EURY
KEOPS complex Cgi121-like subunit
KEOPS complex Cgi121-like subunit {ECO:0000313|EMBL:AGN01633.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Ha
sw_5_scaffold_93_14
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14685..15011)
DNA (327bp) protein (109aa)
KEOPS complex Cgi121-like subunit n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0CEH8_9EURY
KEOPS complex Cgi121-like subunit {ECO:0000313|EMBL:ELZ21655.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina
hypothetical protein
sw_5_scaffold_93_15
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15011..17317)
DNA (2307bp) protein (769aa)
ATP-dependent DNA helicase Hel308 {ECO:0000256|HAMAP-Rule:MF_00442}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00442};; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halob
hel308a; ATP-dependent DNA helicase Hel308 (EC:3.6.4.12)
Putative ski2-type helicase n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YVU2_9EURY
sw_5_scaffold_93_16
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17462..17704
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NZD3_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV46819.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_5_scaffold_93_17
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17755..19938
DNA (2184bp) protein (728aa)
Bacterio-opsin activator n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HS61_9EURY
Bacterio-opsin activator {ECO:0000313|EMBL:ELZ87440.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans ATCC BAA-151
bat; bacterio-opsin activator
sw_5_scaffold_93_18
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20056..20913
DNA (858bp) protein (286aa)
Lycopene cyclase domain-containing protein n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HMV1_9EURY
Lycopene cyclase domain-containing protein {ECO:0000313|EMBL:ESP89259.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source
lycopene cyclase domain-containing protein
sw_5_scaffold_93_19
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20922..22076
DNA (1155bp) protein (385aa)
Brp-like protein-like n=2 Tax=Haloarcula RepID=Q5V0N2_HALMA
blh; Brp-like protein-like
Brp-like protein {ECO:0000313|EMBL:EMA20356.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC 33799.;
sw_5_scaffold_93_20
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(22083..23000)
DNA (918bp) protein (306aa)
Lactate/malate dehydrogenase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P026_HALMD
malate dehydrogenase
Lactate/malate dehydrogenase {ECO:0000313|EMBL:ACV46934.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="H
sw_5_scaffold_93_21
Natronolimnobius innermongolicus, Natronolimnobius, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23216..23575
DNA (360bp) protein (120aa)
Uncharacterized protein n=1 Tax=Natronolimnobius innermongolicus JCM 12255 RepID=L9WTY9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY52934.1}; TaxID=1227499 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronolimnobius.;" source="Natronolimnobius innermongo
sw_5_scaffold_93_22
unknown

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23701..24765
DNA (1065bp) protein (355aa)

This feature has no annotations

sw_5_scaffold_93_23
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24866..25300
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:ADD07337.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba magadii (strain ATCC 4309
sw_5_scaffold_93_24
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25406..26905)
DNA (1500bp) protein (500aa)
LVIVD repeat-containing protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IAI1_9EURY
Nitrogen fixation protein NifU {ECO:0000313|EMBL:AHG02743.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp.
LVIVD repeat-containing protein
sw_5_scaffold_93_25
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26959..27972)
DNA (1014bp) protein (338aa)
ROK family protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FHL2_9EURY
ROK family protein {ECO:0000313|EMBL:ELZ58074.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700873.;
glucokinase
sw_5_scaffold_93_26
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

28263..28706
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D4K5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29612.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
small CPxCG-related zinc finger protein
sw_5_scaffold_93_27
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29201..29413)
DNA (213bp) protein (71aa)
Transposase (IS891/IS1136/IS1341/IS605) n=1 Tax=Halorhabdus tiamatea SARL4B RepID=S6CTX8_9EURY
transposase (IS891/IS1136/IS1341/IS605)
Transposase (IS891/IS1136/IS1341/IS605) {ECO:0000313|EMBL:CCQ33387.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdu
sw_5_scaffold_93_28
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(29497..30321)
DNA (825bp) protein (275aa)
IS1341-type transposase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5T3_9EURY
IS1341-type transposase {ECO:0000313|EMBL:EMA52025.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
transposase (IS891/IS1136/IS1341/IS605)
sw_5_scaffold_93_29
Halobiforma nitratireducens, Halobiforma, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

30691..31755
DNA (1065bp) protein (355aa)
ATPase AAA n=1 Tax=Halobiforma nitratireducens JCM 10879 RepID=M0LLL6_9EURY
ATPase AAA {ECO:0000313|EMBL:EMA33349.1}; TaxID=1227454 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halobiforma.;" source="Halobiforma nitratireducens JCM 10879.;"
moxr-like ATPase
Displaying items 1-30 of 117 in total

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