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sw_6_scaffold_1065

Search features with annotation key words

Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1065_1
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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275..1045
DNA (771bp) protein (257aa)
ArcR family transcription regulator n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L7D7_HALJP
ArcR family transcription regulator {ECO:0000313|EMBL:EMA28389.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japo
ArcR family transcriptional regulator
sw_6_scaffold_1065_2
unknown

Not on your lists

comp(956..1573)
DNA (618bp) protein (206aa)

This feature has no annotations

sw_6_scaffold_1065_3
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1738..2886)
DNA (1149bp) protein (383aa)
Oxidoreductase n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GPX0_HALVD
oxidoreductase
Oxidoreductase {ECO:0000313|EMBL:ADE01615.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 29605 / DS
sw_6_scaffold_1065_4
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3032..4132
DNA (1101bp) protein (367aa)
NADH-dependent dehydrogenase n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JB81_9EURY
NADH-dependent dehydrogenase {ECO:0000313|EMBL:EMA06251.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC
NADH-dependent dehydrogenase
sw_6_scaffold_1065_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4207..4515)
DNA (309bp) protein (103aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0G0_9EURY
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:ELZ27624.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source=
sw_6_scaffold_1065_6
Halonotius sp. J07HN6, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4629..4901
DNA (273bp) protein (91aa)
putative glycerate kinase id=24620200 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Putative glycerate kinase {ECO:0000313|EMBL:ERH03129.1}; TaxID=1238427 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halonotius.;" source="Halonotius sp. J07HN6.;"
putative glycerate kinase
sw_6_scaffold_1065_7
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4864..5100
DNA (237bp) protein (79aa)
Hydroxypyruvate reductase n=3 Tax=Halococcus hamelinensis RepID=M0M9E6_9EURY
Hydroxypyruvate reductase {ECO:0000313|EMBL:EMA41259.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinensis 1
Hydroxypyruvate reductase
sw_6_scaffold_1065_8

Not on your lists

5330..6514
DNA (1185bp) protein (395aa)
Major facilitator superfamily MFS_1 n=1 Tax=halophilic archaeon DL31 RepID=G2MMY6_9ARCH
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEN06762.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_1065_9
Saccharomonospora glauca, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6941..8368
DNA (1428bp) protein (476aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Saccharomonospora glauca K62 RepID=I1D1H3_9PSEU
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EIE98797.1}; Flags: Precursor;; TaxID=928724 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharo
ABC-type sugar transport system, periplasmic component
sw_6_scaffold_1065_10
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8625..10478)
DNA (1854bp) protein (618aa)
hypothetical protein n=1 Tax=Saccharomonospora saliphila RepID=UPI0003764B87
Uncharacterized protein {ECO:0000313|EMBL:KGE89327.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
glucosyl hydrolase family protein
sw_6_scaffold_1065_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10670..11062
DNA (393bp) protein (131aa)
Transposase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0NGP1_9EURY
Transposase {ECO:0000313|EMBL:EMA56728.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13552.;"
sw_6_scaffold_1065_12
unknown

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comp(10990..11139)
DNA (150bp) protein (50aa)

This feature has no annotations

sw_6_scaffold_1065_13
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11735..12895
DNA (1161bp) protein (387aa)
ABC transporter related protein n=1 Tax=Halogranum salarium B-1 RepID=J3JDQ5_9EURY
ABC transporter related protein {ECO:0000313|EMBL:EJN57694.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sugar ABC transporter ATP-binding protein
sw_6_scaffold_1065_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12903..13838
DNA (936bp) protein (312aa)
ABC transporter permease n=1 Tax=Arthrobacter sp. 135MFCol5.1 RepID=UPI0003721655
sugar ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
binding-protein-dependent transport systems inner membrane component
sw_6_scaffold_1065_15
Bifidobacterium asteroides, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13838..14722
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Elioraea tepidiphila RepID=UPI00037F9685
Sugar ABC transporter, permease protein {ECO:0000313|EMBL:KJY49031.1}; TaxID=1684 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium a
sugar ABC transporter permease
sw_6_scaffold_1065_16
unknown

Not on your lists

14725..15162
DNA (438bp) protein (146aa)

This feature has no annotations

sw_6_scaffold_1065_17
unknown

Not on your lists

comp(15635..15769)
DNA (135bp) protein (45aa)

This feature has no annotations

sw_6_scaffold_1065_18
RLO_PLX_64_10, Bacteria

Not on your lists

16518..18041
DNA (1524bp) protein (508aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI00037A6304
sulfatase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
sulfatase
sw_6_scaffold_1065_19
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18219..18923)
DNA (705bp) protein (235aa)
Non-specific serine/threonine protein kinase n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWF9_9EURY
Non-specific serine/threonine protein kinase {ECO:0000313|EMBL:EMA37912.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloco
hypothetical protein
sw_6_scaffold_1065_20
unknown

Not on your lists

comp(19000..19374)
DNA (375bp) protein (125aa)

This feature has no annotations

sw_6_scaffold_1065_21
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19367..20494)
DNA (1128bp) protein (376aa)
Tryptophan halogenase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D5W0_9EURY
Tryptophan halogenase {ECO:0000313|EMBL:ELZ30248.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase
sw_6_scaffold_1065_22
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20751..22049
DNA (1299bp) protein (433aa)
NMT1/THI5 like domain-containing protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8W7_HALJP
Uncharacterized protein {ECO:0000313|EMBL:KDE58818.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
hypothetical protein
sw_6_scaffold_1065_23
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22075..22845
DNA (771bp) protein (257aa)
Taurine-transporting AtPase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L4B4_HALJP
Taurine-transporting AtPase {ECO:0000313|EMBL:EMA28391.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM
hypothetical protein
sw_6_scaffold_1065_24
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22842..23624
DNA (783bp) protein (261aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L485_HALJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01391.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_6_scaffold_1065_25
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23627..24412
DNA (786bp) protein (262aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L5M9_HALJP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG01392.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.
sw_6_scaffold_1065_26
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24666..26024
DNA (1359bp) protein (453aa)
putative glycerate kinase (EC:2.7.1.165)
Hydroxypyruvate reductase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W5Z2_9EURY
Hydroxypyruvate reductase {ECO:0000313|EMBL:ELY44879.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 1
sw_6_scaffold_1065_27
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(26036..26224)
DNA (189bp) protein (63aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Dihydrolipoyl dehydrogenase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P1A6_HALMD
dihydrolipoamide dehydrogenase
Displaying 27 items

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