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sw_6_scaffold_1074

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1074_1
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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2..862
DNA (861bp) protein (287aa)
Transposase n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G0E5_9EURY
Transposase {ECO:0000313|EMBL:ELZ65776.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;"
transposase, IS605 OrfB family, central region
sw_6_scaffold_1074_2

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comp(982..1380)
DNA (399bp) protein (133aa)
Putative dioxygenase of extradiol dioxygenase family n=1 Tax=uncultured archaeon A07HB70 RepID=V4XE44_9ARCH
Putative dioxygenase of extradiol dioxygenase family {ECO:0000313|EMBL:ESS06264.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
glyoxalase
sw_6_scaffold_1074_3

Not on your lists

1668..1988
DNA (321bp) protein (107aa)
Transposase, IS605 OrfB family, central region n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y5E3_9ARCH
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:ESS07931.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
transposase, IS605 OrfB family
sw_6_scaffold_1074_4
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2034..2189
DNA (156bp) protein (52aa)
Transposase, IS605 OrfB family protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0KLB4_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:EMA20959.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ca
transposase, IS605 OrfB family, central region
sw_6_scaffold_1074_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2186..2635)
DNA (450bp) protein (150aa)
Transposase IS200-family protein n=2 Tax=Halobacteriaceae RepID=C7NYP4_HALMD
transposase IS200-family protein
Transposase IS200-family protein {ECO:0000313|EMBL:ACV46705.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mu
sw_6_scaffold_1074_6
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2906..3658
DNA (753bp) protein (251aa)
Uncharacterized protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AXR5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ02209.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
hypothetical protein rbh
sw_6_scaffold_1074_7
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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3661..5508
DNA (1848bp) protein (616aa)
Chromosome segregation ATPase-like protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AUG7_9EURY
Chromosome segregation ATPase-like protein {ECO:0000313|EMBL:ELZ02210.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyp
hypothetical protein
sw_6_scaffold_1074_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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6069..6191
DNA (123bp) protein (41aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KPK2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA23297.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_6_scaffold_1074_9
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6192..7376
DNA (1185bp) protein (395aa)
Transposase, IS605 OrfB family protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H878_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELZ79937.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbons
transposase, IS605 OrfB family
sw_6_scaffold_1074_10
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7496..7714
DNA (219bp) protein (73aa)
Uncharacterized protein n=2 Tax=Natrinema RepID=I7BQ82_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY77047.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_6_scaffold_1074_11

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comp(7721..8281)
DNA (561bp) protein (187aa)
TATA-box-binding protein n=1 Tax=halophilic archaeon DL31 RepID=G2MKZ3_9ARCH
TATA-box-binding protein
TATA-box-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; Box A-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA sequence-binding protein {ECO:0000256|HAMAP-Rule:MF_00408}; TATA-box factor {E
sw_6_scaffold_1074_12
Halogeometricum borinquense, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8664..9743
DNA (1080bp) protein (360aa)
Transposase n=1 Tax=Halogeometricum borinquense (strain ATCC 700274 / DSM 11551 / JCM 10706 / PR3) RepID=E4NPB8_HALBP
transposase
Transposase {ECO:0000313|EMBL:ADQ66473.1}; TaxID=469382 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum borinquense (strain ATC
sw_6_scaffold_1074_13
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9823..10050)
DNA (228bp) protein (76aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0AD23_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY96296.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
hypothetical protein
sw_6_scaffold_1074_14
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10261..11007)
DNA (747bp) protein (249aa)
ABC-type transport system permease n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KDR1_HALAR
ABC-type transport system permease {ECO:0000313|EMBL:EMA17960.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argen
ABC-type transport system permease protein
sw_6_scaffold_1074_15
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11156..11956)
DNA (801bp) protein (267aa)
ABC transporter-like protein n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0K9S7_HALAR
ABC transporter-like protein {ECO:0000313|EMBL:EMA17961.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinens
ABC transporter-like protein
sw_6_scaffold_1074_16
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12261..13160
DNA (900bp) protein (300aa)
Uncharacterized protein n=2 Tax=Natrinema RepID=I7D151_NATSJ
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ELY77048.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_6_scaffold_1074_17
unknown

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comp(13126..13704)
DNA (579bp) protein (193aa)

This feature has no annotations

sw_6_scaffold_1074_18
unknown

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comp(13763..14146)
DNA (384bp) protein (128aa)

This feature has no annotations

sw_6_scaffold_1074_19
Halorubrum sp. J07HR59, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14322..14762
DNA (441bp) protein (147aa)
Uncharacterized protein id=24635214 bin=Halorubrum_J07HR59 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=Halorubrum_J07HR59
Uncharacterized protein {ECO:0000313|EMBL:ERH03231.1}; TaxID=1238428 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. J07HR59.;"
sw_6_scaffold_1074_20
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14577..15554)
DNA (978bp) protein (326aa)
Na+/H+ antiporter n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YWF9_9EURY
Na+/H+ antiporter {ECO:0000313|EMBL:GAD53137.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
sodium:proton antiporter
sw_6_scaffold_1074_21

Not on your lists

15724..16977
DNA (1254bp) protein (418aa)
Transposase, IS605 OrfB family n=1 Tax=halophilic archaeon DL31 RepID=G2MQ74_9ARCH
transposase, IS605 OrfB family
Transposase, IS605 OrfB family {ECO:0000313|EMBL:AEN07843.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_1074_22
unknown

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comp(17332..17469)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_6_scaffold_1074_23
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(17938..18243)
DNA (306bp) protein (102aa)
Transcriptional regulator PadR family protein n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VL96_9EURY
Transcriptional regulator PadR family protein {ECO:0000313|EMBL:ELY37742.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronor
PadR family transcriptional regulator
sw_6_scaffold_1074_24
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18527..19210
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YVM2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY78174.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
hypothetical protein
sw_6_scaffold_1074_25
unknown

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19273..19371
DNA (99bp) protein (33aa)

This feature has no annotations

sw_6_scaffold_1074_26
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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19420..20886
DNA (1467bp) protein (489aa)
Protein translocase subunit SecY n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AXS0_9EURY
Protein translocase subunit SecY {ECO:0000256|HAMAP-Rule:MF_01465, ECO:0000256|RuleBase:RU000537}; Protein transport protein SEC61 subunit alpha homolog {ECO:0000256|HAMAP-Rule:MF_01465}; TaxID=122749
preprotein translocase Sec61 alpha subunit
sw_6_scaffold_1074_27
unknown

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20939..20998
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 27 items

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