ggKbase home page

sw_6_scaffold_108

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_108_1
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..128)
DNA (126bp) protein (42aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
1,4-dihydroxy-2-naphthoate octaprenyltransferase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LB65_HALJP
1,4-dihydroxy-2-naphthoate prenyltransferase
sw_6_scaffold_108_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists


comp(494..1543)
DNA (1050bp) protein (350aa)
dph2; S-adenosyl-L-methionine:L-histidine 3-amino-3-carboxypropyltransferase (EC:2.5.1.-)
S-adenosyl-L-methionine:L-histidine 3-amino-3-carboxypropyltransferase {ECO:0000313|EMBL:CCQ36847.1}; EC=2.5.1.- {ECO:0000313|EMBL:CCQ36847.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacte
S-adenosyl-L-methionine:L-histidine 3-amino-3-carboxypropyltransferase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XRK6_NATM8
sw_6_scaffold_108_3
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1632..2039
DNA (408bp) protein (136aa)
Uncharacterized protein n=5 Tax=Haloarcula RepID=G0HY40_HALHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM56841.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_6_scaffold_108_4
unknown

Not on your lists

comp(2472..2855)
DNA (384bp) protein (128aa)

This feature has no annotations

sw_6_scaffold_108_5
Natrialba magadii, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2918..3760
DNA (843bp) protein (281aa)
Beta-lactamase n=1 Tax=Natrialba magadii (strain ATCC 43099 / DSM 3394 / NCIMB 2190 / MS3) RepID=D3SU50_NATMM
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ELY29085.1}; Beta-lactamase domain protein {ECO:0000313|EMBL:ADD07139.1}; TaxID=547559 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natr
sw_6_scaffold_108_6
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3800..4684
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7NYR7_HALMD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48606.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_6_scaffold_108_7
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4823..5020
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Halorubrum sp. AJ67 RepID=V6DS04_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CDK37978.1}; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum sp. AJ67.;"
sw_6_scaffold_108_8
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5528..7309
DNA (1782bp) protein (594aa)
L-lactate permease n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KAX8_9EURY
L-lactate permease {ECO:0000313|EMBL:EMA18376.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM 13557
L-lactate permease
sw_6_scaffold_108_9
unknown

Not on your lists

comp(7590..7871)
DNA (282bp) protein (94aa)

This feature has no annotations

sw_6_scaffold_108_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8177..9100)
DNA (924bp) protein (308aa)
XerC/D-like integrase n=2 Tax=Halobacterium salinarum RepID=B0R498_HALS3
XerC/D integrase
Integrase/recombinase {ECO:0000313|EMBL:AAG19292.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (str
sw_6_scaffold_108_11
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9090..9503)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2C7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA52087.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_6_scaffold_108_12
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9749..9931
DNA (183bp) protein (61aa)
Glycosyl transferase family 2 n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EXD1_9EURY
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKF39054.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
wcaA; glycosyltransferase
sw_6_scaffold_108_13
Haloterrigena limicola, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9909..10346
DNA (438bp) protein (146aa)
Family 2 glycosyl transferase n=1 Tax=Haloterrigena limicola JCM 13563 RepID=M0CJV8_9EURY
Family 2 glycosyl transferase {ECO:0000313|EMBL:ELZ22174.1}; TaxID=1230457 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena limicola J
family 2 glycosyl transferase
sw_6_scaffold_108_14
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10654..11280)
DNA (627bp) protein (209aa)
Bacterio-opsin activator HTH domain protein n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0P2Y3_9EURY
Bacterio-opsin activator HTH domain protein {ECO:0000313|EMBL:EMA63899.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
sw_6_scaffold_108_15
Halalkalicoccus jeotgali, Halalkalicoccus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11320..12537)
DNA (1218bp) protein (406aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J3K3_HALJB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADJ15310.1}; TaxID=795797 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halalkalicoccus.;" source="Halalkalicoccus jeotgal
sw_6_scaffold_108_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12732..13919)
DNA (1188bp) protein (396aa)
ABC-type transport system ATP-binding protein (Probable substrate iron) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IPN5_NATPD
abc24a; spermidine/putrescine/iron ABC transporter ATP-binding protein
ABC-type transport system ATP-binding protein {ECO:0000313|EMBL:CAI49915.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natr
sw_6_scaffold_108_17
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14126..16282)
DNA (2157bp) protein (719aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000364F3B6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV48386.1}; Flags: Precursor;; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomi
sw_6_scaffold_108_18
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16328..17935)
DNA (1608bp) protein (536aa)
Iron ABC transporter permease n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MA86_HALMO
Iron ABC transporter permease {ECO:0000313|EMBL:EMA41315.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DS
ABC transporter
sw_6_scaffold_108_19
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17991..19211)
DNA (1221bp) protein (407aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0MV35_9EURY
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EMA49597.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Haloc
family 1 extracellular solute-binding protein
sw_6_scaffold_108_20
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19204..20415)
DNA (1212bp) protein (404aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0D7C4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ30743.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
Alpha-1,4-glucan-protein synthase, UDP-forming
sw_6_scaffold_108_21

Not on your lists

20518..21687
DNA (1170bp) protein (390aa)
Major facilitator superfamily MFS_1 n=1 Tax=halophilic archaeon DL31 RepID=G2MHT8_9ARCH
major facilitator superfamily protein
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEN06904.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_108_22
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

21712..22863
DNA (1152bp) protein (384aa)
acaB1; acetyl-CoA C-acyltransferase (EC:2.3.1.16)
Acetyl-CoA acetyltransferase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MYP6_9EURY
Acetyl-CoA acetyltransferase {ECO:0000313|EMBL:EMA50438.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae
sw_6_scaffold_108_23
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22866..23219
DNA (354bp) protein (118aa)
Putative uncharacterized protein (Fragment) n=2 Tax=cellular organisms RepID=G6G0H4_9CYAN
Uncharacterized protein {ECO:0000313|EMBL:AHG03723.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_6_scaffold_108_24
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23220..23789)
DNA (570bp) protein (190aa)
Uncharacterized protein n=1 Tax=Halococcus saccharolyticus DSM 5350 RepID=M0MI33_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA45382.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyticus
hypothetical protein
sw_6_scaffold_108_25
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23870..24568
DNA (699bp) protein (233aa)
Uncharacterized protein n=1 Tax=Haloterrigena salina JCM 13891 RepID=M0BZV2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ16485.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891
hypothetical protein
sw_6_scaffold_108_26
unknown

Not on your lists

24619..24777
DNA (159bp) protein (53aa)

This feature has no annotations

sw_6_scaffold_108_27
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(24830..25381)
DNA (552bp) protein (184aa)
DNA-binding protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E4W4_9EURY
DNA polymerase III subunit beta {ECO:0000313|EMBL:KDS91512.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;
dpsA; DNA-binding protein
sw_6_scaffold_108_28
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25599..25982)
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGG9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60091.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
sw_6_scaffold_108_29
Natrinema versiforme, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26074..26514
DNA (441bp) protein (147aa)
MaoC domain protein dehydratase n=1 Tax=Natrinema versiforme JCM 10478 RepID=L9XSL6_9EURY
MaoC domain protein dehydratase {ECO:0000313|EMBL:ELY64502.1}; TaxID=1227496 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema versiforme JCM 1
acyl dehydratase
sw_6_scaffold_108_30
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26562..26867
DNA (306bp) protein (102aa)
MazG nucleotide pyrophosphohydrolase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTM4_9EURY
MazG nucleotide pyrophosphohydrolase {ECO:0000313|EMBL:EFW91953.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus
nucleotide pyrophosphohydrolase
Displaying items 1-30 of 35 in total

View Taxonomy