ggKbase home page

sw_6_scaffold_1162

Search features with annotation key words

Displaying 23 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1162_1

Not on your lists

comp(3..1586)
DNA (1584bp) protein (528aa)
Peptidase S9 prolyl oligopeptidase n=1 Tax=uncultured bacterium 89 RepID=E3T696_9BACT
Peptidase S9 prolyl oligopeptidase {ECO:0000313|EMBL:ADC35840.1}; TaxID=698393 species="Bacteria; environmental samples.;" source="uncultured bacterium 89.;"
peptidase S9 prolyl oligopeptidase
sw_6_scaffold_1162_trna_1
unknown

Not on your lists

1837..1910
DNA (74bp)
transferRNA
sw_6_scaffold_1162_2
GWF2_OD1_39_13, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(2065..2508)
DNA (444bp) protein (148aa)
Mobile element protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9P7G4_9DELT
Site-specific recombinase, phage integrase family protein Tax=GWF2_OD1_39_13
phage integrase family protein
sw_6_scaffold_1162_3
Aedes aegypti, Aedes, Diptera, Neoptera, Arthropoda, Metazoa

Not on your lists

3899..4435
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Butyrivibrio fibrisolvens RepID=UPI0003B34F76
hypothetical protein
AAEL007861-PA {ECO:0000313|EMBL:EAT40426.1}; TaxID=7159 species="Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culi
sw_6_scaffold_1162_4
unknown

Not on your lists

4438..4653
DNA (216bp) protein (72aa)

This feature has no annotations

sw_6_scaffold_1162_5
Caldithrix abyssi, Caldithrix, Bacteria

Not on your lists

4669..4962
DNA (294bp) protein (98aa)
Nuclease (SNase domain-containing protein) n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRA9_9BACT
Nuclease (SNase domain-containing protein) {ECO:0000313|EMBL:EHO42390.1}; TaxID=880073 species="Bacteria; Caldithrix.;" source="Caldithrix abyssi DSM 13497.;"
hypothetical protein
sw_6_scaffold_1162_6
unknown

Not on your lists

5078..5290
DNA (213bp) protein (71aa)

This feature has no annotations

sw_6_scaffold_1162_7
Desulfotomaculum reducens, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5391..5774
DNA (384bp) protein (128aa)
Peptidase M15A n=1 Tax=Desulfotomaculum reducens (strain MI-1) RepID=A4J1V3_DESRM
peptidase M15A
Peptidase M15A {ECO:0000313|EMBL:ABO49056.1}; TaxID=349161 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum reducens (strain MI-1)
sw_6_scaffold_1162_8
unknown

Not on your lists

5789..6073
DNA (285bp) protein (95aa)

This feature has no annotations

sw_6_scaffold_1162_9

Not on your lists

6301..7053
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Gemmata obscuriglobus RepID=UPI00016C4648
Marine sediment metagenome DNA, contig: S01H1_S18435 {ECO:0000313|EMBL:GAG23361.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
P4 alpha zinc-binding domain-containing protein
sw_6_scaffold_1162_10

Not on your lists

7078..7815
DNA (738bp) protein (246aa)
P4 alpha zinc-binding domain protein n=1 Tax=Planctomyces limnophilus (strain ATCC 43296 / DSM 3776 / IFAM 1008 / 290) RepID=D5ST64_PLAL2
Uncharacterized protein {ECO:0000313|EMBL:KKM14902.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
P4 alpha zinc-binding domain-containing protein
sw_6_scaffold_1162_11
unknown

Not on your lists

7955..8182
DNA (228bp) protein (76aa)

This feature has no annotations

sw_6_scaffold_1162_12
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8304..8651)
DNA (348bp) protein (116aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B5B5C6
Uncharacterized protein {ECO:0000313|EMBL:KKG12538.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
sw_6_scaffold_1162_13
Roseiflexus sp. RS-1, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(8651..8947)
DNA (297bp) protein (99aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B4F1DF
DNA polymerase subunit beta
DNA polymerase, beta domain protein region {ECO:0000313|EMBL:ABQ90906.1}; TaxID=357808 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" sour
sw_6_scaffold_1162_14
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9811..10191)
DNA (381bp) protein (127aa)
Uncharacterized protein n=4 Tax=Microcystis aeruginosa RepID=I4F7H7_MICAE
putative aspartyl protease Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
hypothetical protein
sw_6_scaffold_1162_15
Microcystis aeruginosa, Microcystis, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(10188..10457)
DNA (270bp) protein (90aa)
Uncharacterized protein n=4 Tax=Microcystis RepID=I4F7H8_MICAE
Uncharacterized protein {ECO:0000313|EMBL:GAL91232.1}; TaxID=449439 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Microcystis.;" source="Microcystis aeruginosa NIES-44.;"
hypothetical protein
sw_6_scaffold_1162_16
unknown

Not on your lists

10559..10717
DNA (159bp) protein (53aa)

This feature has no annotations

sw_6_scaffold_1162_17
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11011..11529
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9A7_SALRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBH24612.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_1162_18
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

11626..12318
DNA (693bp) protein (231aa)
Segregation and condensation protein B n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2G4_SALRD
scpB; segregation and condensation protein B
Segregation and condensation protein B {ECO:0000256|SAAS:SAAS00086417}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="
sw_6_scaffold_1162_19
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

12379..13134
DNA (756bp) protein (252aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887, ECO:0000313|EMBL:CBH24614.1};; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II
Pseudouridine synthase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9A9_SALRM
rluB; ribosomal large subunit pseudouridine synthase B
sw_6_scaffold_1162_20
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13149..14675
DNA (1527bp) protein (509aa)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H9B0_SALRM
guaB; Inosine-5'-monophosphate dehydrogenase
Inosine-5'-monophosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964, ECO:0000256|RuleBase:RU003928}; Short=IMP dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01964};; Short=IMPD {ECO:0000256|HAMAP-Rule:
sw_6_scaffold_1162_21
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

14728..15798
DNA (1071bp) protein (357aa)
Aminopeptidase P, putative n=1 Tax=Salinibacter ruber (strain DSM 13855 / M31) RepID=Q2S2G1_SALRD
aminopeptidase P
Aminopeptidase P, putative {ECO:0000313|EMBL:ABC44278.1}; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter r
sw_6_scaffold_1162_22
BJP_IG2103_Cloacimonetes_45_8, Cloacimonetes, Bacteria

Not on your lists

15920..16492
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Salisaeta longa RepID=UPI0003B39232
peptidase S8/S53 subtilisin kexin sedolisin
Tax=BJP_IG2103_Cloacimonetes_45_8
Displaying 23 items

View Taxonomy