ggKbase home page

sw_6_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 48 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_120_1

Not on your lists

comp(102..437)
DNA (336bp) protein (112aa)
Zinc finger SWIM domain protein n=2 Tax=Archaea RepID=B9LVE1_HALLT
zinc finger SWIM domain-containing protein
Zinc finger SWIM domain protein {ECO:0000313|EMBL:AEN07664.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_120_2
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(528..704)
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:ERG97380.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
zinc finger SWIM domain protein
hypothetical protein id=24634578 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
sw_6_scaffold_120_3
unknown

Not on your lists

comp(1006..1914)
DNA (909bp) protein (303aa)

This feature has no annotations

sw_6_scaffold_120_4
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1919..5224)
DNA (3306bp) protein (1102aa)
Heat shock protein 60 family chaperone GroEL / Thermosome subunit n=2 Tax=Halarchaeum acidiphilum RepID=U3A3Q3_9EURY
Heat shock protein 60 family chaperone GroEL / Thermosome subunit {ECO:0000313|EMBL:GAD52274.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" sourc
thermosome
sw_6_scaffold_120_5
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5317..6195)
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQK2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62255.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
protein of unknown function (DUF955)
sw_6_scaffold_120_6
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6458..7357
DNA (900bp) protein (300aa)
Metallophosphoesterase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LEB4_HALJP
Metallophosphoesterase {ECO:0000313|EMBL:EMA31907.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 6131
metallophosphoesterase
sw_6_scaffold_120_7
unknown

Not on your lists

7392..7850
DNA (459bp) protein (153aa)

This feature has no annotations

sw_6_scaffold_120_8
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7881..8243)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7C2C0_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO59530.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_6_scaffold_120_9
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8603..8944)
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V7A1_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAV44701.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (stra
sw_6_scaffold_120_10
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(9304..10734)
DNA (1431bp) protein (477aa)
glycosyl transferase family 2 n=1 Tax=Spirosoma panaciterrae RepID=UPI000363F626
glycosyl transferase family protein Tax=RBG_16_NC10_65_8_curated
N-glycosyltransferase
sw_6_scaffold_120_11
unknown

Not on your lists

comp(10759..10959)
DNA (201bp) protein (67aa)

This feature has no annotations

sw_6_scaffold_120_12
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10966..11250)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LCF7_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA31271.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_6_scaffold_120_13
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11367..11591)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JUG4_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELY93610.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
sw_6_scaffold_120_14
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11658..12863)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U3A4B7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:GAD52484.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum MH1-52-1.;"
hypothetical protein
sw_6_scaffold_120_15
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12948..13076)
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DE47_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH39323.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_6_scaffold_120_16
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13076..13762)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI00037DD7AF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO59523.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_6_scaffold_120_17
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13881..14546
DNA (666bp) protein (222aa)
Mrr restriction system protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJR9_9EURY
restriction endonuclease
Mrr restriction system protein {ECO:0000313|EMBL:ERJ06532.1}; Restriction endonuclease {ECO:0000313|EMBL:CCQ35088.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_6_scaffold_120_18
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14628..15245
DNA (618bp) protein (206aa)
Restriction endonuclease n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JUG9_NATP1
restriction endonuclease
Restriction endonuclease {ECO:0000313|EMBL:AGB34041.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM
sw_6_scaffold_120_19
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15424..15765
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JTT1_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB34042.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_120_20
unknown

Not on your lists

15710..15823
DNA (114bp) protein (38aa)

This feature has no annotations

sw_6_scaffold_120_21
Natrialba taiwanensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15989..18331)
DNA (2343bp) protein (781aa)
Uncharacterized protein n=1 Tax=Natrialba taiwanensis DSM 12281 RepID=M0A318_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY93160.1}; TaxID=1230458 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba taiwanensis DSM 12281.;"
sw_6_scaffold_120_22
unknown

Not on your lists

comp(18395..18526)
DNA (132bp) protein (44aa)

This feature has no annotations

sw_6_scaffold_120_23
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18554..18949)
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7CNW9_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO59519.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_6_scaffold_120_24
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19028..19393)
DNA (366bp) protein (122aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZFL5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY84412.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
hypothetical protein
sw_6_scaffold_120_25
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19397..19957)
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JSV5_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33732.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_120_26
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19995..20411)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JTB4_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB34053.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_120_27
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20490..21152)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JS29_NATP1
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGB34054.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_120_28
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21221..21598)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JR01_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33940.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_120_29
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21689..21877)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9ZGW9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY84408.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
hypothetical protein
sw_6_scaffold_120_30
unknown

Not on your lists

22138..22320
DNA (183bp) protein (61aa)

This feature has no annotations

Displaying items 1-30 of 48 in total

View Taxonomy