ggKbase home page

sw_6_scaffold_1280

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1280_1
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..153
DNA (153bp) protein (51aa)
CopG family transcriptional regulator n=2 Tax=Halorubrum distributum RepID=M0EPJ5_9EURY
CopG family transcriptional regulator {ECO:0000313|EMBL:EMA58788.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litore
CopG family protein
sw_6_scaffold_1280_2
unknown

Not on your lists

comp(490..660)
DNA (171bp) protein (57aa)

This feature has no annotations

sw_6_scaffold_1280_3
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(729..1118)
DNA (390bp) protein (130aa)
Putative DNA binding protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D1X6_9EURY
Putative DNA binding protein {ECO:0000313|EMBL:ELZ29491.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbaden
TrmB family transcriptional regulator
sw_6_scaffold_1280_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(1259..1492)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEQ8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ21123.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_1280_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1720..3789
DNA (2070bp) protein (690aa)
Plastocyanin n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CEN4_9EURY
Plastocyanin {ECO:0000313|EMBL:ELZ21093.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.;"
plastocyanin
sw_6_scaffold_1280_6
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3817..4005)
DNA (189bp) protein (63aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI000367FE6F
Uncharacterized protein {ECO:0000313|EMBL:ELZ25670.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_1280_7
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4132..5136
DNA (1005bp) protein (335aa)
Radical SAM domain protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D0D4_9EURY
Radical SAM domain protein {ECO:0000313|EMBL:ELZ28132.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense
hypothetical protein
sw_6_scaffold_1280_8
unknown

Not on your lists

5138..5704
DNA (567bp) protein (189aa)

This feature has no annotations

sw_6_scaffold_1280_9
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5764..6054
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY11_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27493.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_1280_10
unknown

Not on your lists

7291..7473
DNA (183bp) protein (61aa)

This feature has no annotations

sw_6_scaffold_1280_11
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8440..8889
DNA (450bp) protein (150aa)
Deoxyribonuclease/rho domain-containing protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0D047_9EURY
Deoxyribonuclease/rho domain-containing protein {ECO:0000313|EMBL:ELZ27494.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Hal
deoxyribonuclease/rho motif-related TRAM
sw_6_scaffold_1280_12
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9127..10845
DNA (1719bp) protein (573aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWE0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27495.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
hypothetical protein
sw_6_scaffold_1280_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10975..11760
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CWB5_9EURY
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ELZ27496.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex
short-chain dehydrogenase/reductase SDR
sw_6_scaffold_1280_14
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11762..12046)
DNA (285bp) protein (95aa)
Uncharacterized protein n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CY15_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ27498.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-
sw_6_scaffold_1280_15
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12160..13305)
DNA (1146bp) protein (382aa)
N-acylglucosamine 2-epimerase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MUN1_9EURY
N-acylglucosamine 2-epimerase {ECO:0000313|EMBL:EMA48479.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodina
N-acylglucosamine 2-epimerase
sw_6_scaffold_1280_16
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13582..13899
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi J07HQW2 RepID=U1PVM6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERG96461.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
Displaying 16 items

View Taxonomy