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sw_6_scaffold_135

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_135_1
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1..1062
DNA (1062bp) protein (354aa)
LPS biosynthesis protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V1V0_HALMA
lpb2; LPS biosynthesis protein
LPS biosynthesis protein {ECO:0000313|EMBL:AAV46502.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula marismortui (str
sw_6_scaffold_135_2
Natrialba aegyptia, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1056..2513)
DNA (1458bp) protein (486aa)
sulfatase (EC:3.1.6.-)
Sulfatase n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AYE7_9EURY
Sulfatase {ECO:0000313|EMBL:ELZ03352.1}; TaxID=1227491 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba aegyptia DSM 13077.;"
sw_6_scaffold_135_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2553..4154)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EU98_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN57917.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
type I phosphodiesterase/nucleotide pyrophosphatase family protein
sw_6_scaffold_135_4
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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4272..5375
DNA (1104bp) protein (368aa)
Glycosyltransferase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CMC5_9EURY
Glycosyltransferase {ECO:0000313|EMBL:ELZ24420.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="Halosimplex carlsbadense 2-9-1.
glycosyltransferase
sw_6_scaffold_135_5
unknown

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comp(5976..7256)
DNA (1281bp) protein (427aa)

This feature has no annotations

sw_6_scaffold_135_6
Haloferax elongans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7392..8513)
DNA (1122bp) protein (374aa)
glycosyl transferase family protein (EC:2.4.1.-)
Glycoside hydrolase family protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HNI8_9EURY
Glycoside hydrolase family protein {ECO:0000313|EMBL:ELZ86145.1}; TaxID=1230453 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax elongans AT
sw_6_scaffold_135_7
Halanaeroarchaeum sulfurireducens, Halanaeroarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(9089..9574)
DNA (486bp) protein (162aa)
ISA0963-2 transposase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N3R9_9EURY
ISA0963-2 transposase {ECO:0000313|EMBL:AKH97416.1}; TaxID=1604004 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halanaeroarchaeum.;" source="Halanaeroarchaeum sulf
sw_6_scaffold_135_8
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(9726..10841)
DNA (1116bp) protein (372aa)
Putative glycosyltransferase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YZQ6_9EURY
Putative glycosyltransferase {ECO:0000313|EMBL:ELY79740.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;
glycosyl transferase family protein
sw_6_scaffold_135_9
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10878..12011)
DNA (1134bp) protein (378aa)
Putative uncharacterized protein n=1 Tax=Clostridium hathewayi WAL-18680 RepID=G5IB60_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHI61375.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
group 1 glycosyl transferase
sw_6_scaffold_135_10
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(12004..12621)
DNA (618bp) protein (206aa)
Methyltransferase FkbM family n=1 Tax=Haloterrigena turkmenica (strain ATCC 51198 / DSM 5511 / NCIMB 13204 / VKM B-1734) RepID=D2S025_HALTV
FkbM family methyltransferase
Methyltransferase FkbM family {ECO:0000313|EMBL:ADB62722.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkmenica
sw_6_scaffold_135_11
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12952..14757)
DNA (1806bp) protein (602aa)
ABC transporter ATP-binding protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YZJ7_9EURY
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELY79675.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM
trp-7; ABC transporter ATP-binding protein rbh
sw_6_scaffold_135_12
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15090..16076)
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000365AFAF
Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) {ECO:0000313|EMBL:EMA61284.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;
nucleoside-diphosphate-sugar epimerase
sw_6_scaffold_135_13

Not on your lists

16316..17287
DNA (972bp) protein (324aa)
Nucleoside-diphosphate-sugar epimerase n=1 Tax=uncultured archaeon A07HR67 RepID=V4ZQ48_9ARCH
Nucleoside-diphosphate-sugar epimerase {ECO:0000313|EMBL:ESS04760.1}; TaxID=1412871 species="Archaea; environmental samples.;" source="uncultured archaeon A07HR67.;"
putative UDP-glucuronate decarboxylase
sw_6_scaffold_135_14
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17280..18611
DNA (1332bp) protein (444aa)
UDP-glucose 6-dehydrogenase n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AEW8_9EURY
UDP-glucose 6-dehydrogenase {ECO:0000313|EMBL:ELY97300.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 1
nucleotide sugar dehydrogenase
sw_6_scaffold_135_15
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18627..19934)
DNA (1308bp) protein (436aa)
Sugar transferase n=1 Tax=Halorubrum lipolyticum DSM 21995 RepID=M0NZT3_9EURY
Sugar transferase {ECO:0000313|EMBL:EMA63053.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lipolyticum DSM 21995.;"
hypothetical protein
Displaying 15 items

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