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sw_6_scaffold_169

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_169_1
unknown

Not on your lists

comp(1..495)
DNA (495bp) protein (165aa)

This feature has no annotations

sw_6_scaffold_169_2
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(755..1660)
DNA (906bp) protein (302aa)
Transcription initiation factor IIB n=2 Tax=Halobacterium salinarum RepID=B0R9J1_HALS3
tfbH; transcription initiation factor TFB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halo
sw_6_scaffold_169_3
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2582..3127)
DNA (546bp) protein (182aa)
Transcriptional regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAN3_HALMT
Leucine-responsive transcriptional regulator {ECO:0000313|EMBL:CQR51871.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax s
transcriptional regulator
sw_6_scaffold_169_4
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3189..4295)
DNA (1107bp) protein (369aa)
Uncharacterized protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HL37_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ85280.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbonsii ATCC 33959.;
hydantoinase
sw_6_scaffold_169_5
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(4292..5371)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Haloferax volcanii (strain ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB 2012 / VKM B-1768 / DS2) RepID=D4GP77_HALVD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADE01315.1}; TaxID=309800 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (strain ATCC 2
sw_6_scaffold_169_6
Haloferax volcanii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5371..6918)
DNA (1548bp) protein (516aa)
N-methylhydantoinase (ATP-hydrolyzing) A n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JDE6_9EURY
hyuA4; N-methylhydantoinase (ATP-hydrolyzing) A
Hydantoinase {ECO:0000313|EMBL:AAB71802.1}; TaxID=2246 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax volcanii (Halobacterium volcanii).;"
sw_6_scaffold_169_7
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6911..8002)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0FVR4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:CQR51880.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
hypothetical protein
sw_6_scaffold_169_8
Haloferax sp. ATCC BAA-645, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7995..9110)
DNA (1116bp) protein (372aa)
Peptide ABC transporter ATP-binding protein n=3 Tax=Haloferax RepID=M0FQ08_9EURY
Peptide ABC transporter ATP-binding protein {ECO:0000313|EMBL:ELZ62020.1}; TaxID=1227463 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp
dppF11; peptide ABC transporter ATP-binding protein
sw_6_scaffold_169_9
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9103..10248)
DNA (1146bp) protein (382aa)
Peptide ABC transporter ATP-binding protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JBL3_9EURY
dppD; dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein
Dipeptide/oligopeptide/nickel ABC transporter ATP-binding protein {ECO:0000313|EMBL:AFK20743.1}; Peptide ABC transporter ATPase {ECO:0000313|EMBL:AHZ24005.1}; TaxID=523841 species="Archaea; Euryarchae
sw_6_scaffold_169_10
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10245..11165)
DNA (921bp) protein (307aa)
Peptide ABC transporter permease n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JBB4_9EURY
Putative D,D-dipeptide transport system permease protein DdpC {ECO:0000313|EMBL:CQR51885.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" so
dppC11; peptide ABC transporter permease
sw_6_scaffold_169_11
Haloferax alexandrinus, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11167..12198)
DNA (1032bp) protein (344aa)
Peptide ABC transporter permease n=3 Tax=Haloferax RepID=L5NJ99_9EURY
Peptide ABC transporter permease {ECO:0000313|EMBL:ELZ95581.1}; TaxID=1227458 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax alexandrinus
dppB11; peptide ABC transporter permease
sw_6_scaffold_169_12
Haloferax sp. ATCC BAA-646, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12195..13910)
DNA (1716bp) protein (572aa)
Peptide ABC transporter substrate-binding protein n=3 Tax=Haloferax RepID=M0FPD8_9EURY
Peptide ABC transporter substrate-binding protein {ECO:0000313|EMBL:ELZ61911.1}; TaxID=1227464 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofe
dppA11; peptide ABC transporter substrate-binding protein
sw_6_scaffold_169_13
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14325..15479)
DNA (1155bp) protein (385aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JTS6_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB34037.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_169_14
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17254..18327
DNA (1074bp) protein (358aa)
Exopolyphosphatase-like enzyme n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JJN6_NATP1
exopolyphosphatase-like enzyme rbh
Exopolyphosphatase-like enzyme {ECO:0000313|EMBL:AGB31745.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strai
sw_6_scaffold_169_15
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18542..19042)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JMD8_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB31742.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_169_16
unknown

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comp(19026..19466)
DNA (441bp) protein (147aa)

This feature has no annotations

sw_6_scaffold_169_17
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19563..20255)
DNA (693bp) protein (231aa)
UspA domain protein n=2 Tax=Halobacterium salinarum RepID=B0R9M2_HALS3
UpsA domain-containing protein
Cationic amino acid transporter {ECO:0000313|EMBL:AAG20846.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sali
sw_6_scaffold_169_18
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20252..20905)
DNA (654bp) protein (218aa)
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276, ECO:0000313|EMBL:CAP15448.1};; ATP phosphohydrolase [potassium-transporting] C ch
Potassium-transporting ATPase C chain n=2 Tax=Halobacterium salinarum RepID=ATKC_HALSA
sw_6_scaffold_169_19
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20905..23061)
DNA (2157bp) protein (719aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase B chain n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKD6_NATP1
P-type ATPase, translocating
sw_6_scaffold_169_20
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23063..24811)
DNA (1749bp) protein (583aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
Potassium-transporting ATPase A chain n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JLL8_NATP1
K+-transporting ATPase, KdpA
sw_6_scaffold_169_21
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25126..25830
DNA (705bp) protein (235aa)
TrkA domain protein n=2 Tax=Halobacterium salinarum RepID=B0R9L7_HALS3
trkA2; TrkA domain-containing protein
TRK potassium uptake system protein {ECO:0000313|EMBL:AAG20842.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium
sw_6_scaffold_169_22
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25883..27826)
DNA (1944bp) protein (648aa)
Smc-like protein Sph2 n=2 Tax=Halobacterium salinarum RepID=SPH2_HALS3
sph2; SMC-like protein sph2
Smc-like protein Sph2; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (strain ATCC 700922 / JCM 11081 /
sw_6_scaffold_169_23
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(28204..28806)
DNA (603bp) protein (201aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JKC8_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB31734.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_169_24
unknown

Not on your lists

29307..29501
DNA (195bp) protein (65aa)

This feature has no annotations

sw_6_scaffold_169_25
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(29877..30245)
DNA (369bp) protein (123aa)
OB-fold nucleic acid binding domain protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D3J4_9EURY
OB-fold nucleic acid binding domain protein {ECO:0000313|EMBL:ELZ28729.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Haloge
hypothetical protein
Displaying 25 items

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