ggKbase home page

sw_6_scaffold_18

Search features with annotation key words

Displaying items 1-30 of 51 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_18_1
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3..2558)
DNA (2556bp) protein (852aa)
helicase family protein with metal-binding cysteine cluster id=24647028 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
Putative helicase family protein {ECO:0000313|EMBL:ERH11196.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
helicase family protein with metal-binding cysteine cluster
sw_6_scaffold_18_2
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2596..4089)
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W9U7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY46239.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangense JCM 106
hypothetical protein
sw_6_scaffold_18_3
unknown

Not on your lists

comp(4130..4336)
DNA (207bp) protein (69aa)

This feature has no annotations

sw_6_scaffold_18_4
unknown

Not on your lists

4425..4904
DNA (480bp) protein (160aa)

This feature has no annotations

sw_6_scaffold_18_5
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5025..6293
DNA (1269bp) protein (423aa)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=797114 species="Archaea; Euryarchaeota; Halob
dinP; DNA polymerase IV (archaeal DinB-like DNA polymerase) (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CM29_9EURY
sw_6_scaffold_18_6
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6331..6615
DNA (285bp) protein (95aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IC07_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG04101.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_6_scaffold_18_7
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6668..8548
DNA (1881bp) protein (627aa)
Uncharacterized protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E562_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ42930.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum DSM 11
hypothetical protein
sw_6_scaffold_18_8
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8549..9190)
DNA (642bp) protein (214aa)
triosephosphate isomerase (EC:5.3.1.1)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W363_9EURY
sw_6_scaffold_18_9
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9321..9623
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0K5P0_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB39835.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
sw_6_scaffold_18_10
Natrinema sp. J7-2, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9624..10136
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Natrinema sp. (strain J7-2) RepID=I7BM55_NATSJ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFO57557.1}; TaxID=406552 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema sp. (strain J7-2).;"
sw_6_scaffold_18_11
Halorubrum sp. AJ67, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10158..10883)
DNA (726bp) protein (242aa)
Beta-lactamase {ECO:0000313|EMBL:CDK38637.1}; EC=3.1.4.54 {ECO:0000313|EMBL:CDK38637.1};; TaxID=1173487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" sour
Beta-lactamase n=1 Tax=Halorubrum sp. AJ67 RepID=V6DR14_9EURY
beta-lactamase
sw_6_scaffold_18_12
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10883..11413)
DNA (531bp) protein (177aa)
Putative uncharacterized protein n=2 Tax=Haladaptatus paucihalophilus RepID=E7QSU8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW92507.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
XRE family transcriptional regulator
sw_6_scaffold_18_13
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11458..13584)
DNA (2127bp) protein (709aa)
Cell division control protein 48/AAA family ATPase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CPI6_9EURY
Cell division control protein 48/AAA family ATPase {ECO:0000313|EMBL:ELZ24312.1}; TaxID=797114 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halosimplex.;" source="
AAA-type ATPase (transitional ATPase homolog)
sw_6_scaffold_18_14
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13637..13876)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4VVH8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00251.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_6_scaffold_18_15
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13876..14304)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQP8_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36495.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_6_scaffold_18_16
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14406..15251
DNA (846bp) protein (282aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00370}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00370};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00370};; TaxID=797209 species="Archaea; Euryarchaeota; Halobacte
aroK; shikimate kinase (EC:2.7.1.71)
Shikimate kinase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUN5_9EURY
sw_6_scaffold_18_17
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15209..15529
DNA (321bp) protein (107aa)
aroQ; chorismate mutase (EC:5.4.99.5)
Chorismate mutase n=2 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP71_NATPD
Chorismate mutase {ECO:0000313|EMBL:ELZ13022.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermotolerans DSM 115
sw_6_scaffold_18_18
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15659..15946)
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0APH3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY99842.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
sw_6_scaffold_18_19
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15939..16211)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0AR34_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY99843.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
hypothetical protein
sw_6_scaffold_18_20
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16396..16884)
DNA (489bp) protein (163aa)
Dual specificity protein phosphatase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0NER5_9EURY
Dual specificity protein phosphatase {ECO:0000313|EMBL:EMA55569.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus sal
phosphatase
sw_6_scaffold_18_21
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16985..17503)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Halomicrobium katesii RepID=UPI00037E9C3B
PAS fold domain-containing protein
PAS fold domain protein {ECO:0000313|EMBL:ACV47558.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei
sw_6_scaffold_18_22
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17586..18263)
DNA (678bp) protein (226aa)
Carbonic anhydrase n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQM3_HALUD
carbonic anhydrase
Carbonic anhydrase {ECO:0000313|EMBL:ACV10482.1}; Flags: Precursor;; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus u
sw_6_scaffold_18_23
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(18312..19094)
DNA (783bp) protein (261aa)
5'-nucleotidase SurE {ECO:0000256|HAMAP-Rule:MF_00060}; EC=3.1.3.5 {ECO:0000256|HAMAP-Rule:MF_00060};; Nucleoside 5'-monophosphate phosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00060}; TaxID=1230451 spe
surE; acid phosphatase SurE (EC:3.1.3.2)
5'-nucleotidase SurE n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KT84_HALAR
sw_6_scaffold_18_24
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19143..20534)
DNA (1392bp) protein (464aa)
TyrA operon protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N8S0_9EURY
TyrA operon protein {ECO:0000313|EMBL:EMA53973.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JCM 13
hypothetical protein
sw_6_scaffold_18_25
Halococcus morrhuae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(20531..21247)
DNA (717bp) protein (239aa)
tyrA; prephenate dehydrogenase (EC:1.3.1.12)
Prephenate dehydrogenase n=1 Tax=Halococcus morrhuae DSM 1307 RepID=M0MUA2_HALMO
Prephenate dehydrogenase {ECO:0000313|EMBL:EMA48903.1}; TaxID=931277 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus morrhuae DSM 130
sw_6_scaffold_18_26
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21285..22460)
DNA (1176bp) protein (392aa)
pepQ; aminopeptidase (EC:3.4.11.9)
Peptidase M24 family protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQG7_NATPD
Peptidase M24 family protein (Homolog to Xaa-Pro dipeptidase) {ECO:0000313|EMBL:CAI49629.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas
sw_6_scaffold_18_27
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22549..23829
DNA (1281bp) protein (427aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_0
Probable 3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D445_HALXS
sw_6_scaffold_18_28
Halosimplex carlsbadense, Halosimplex, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

23993..25216
DNA (1224bp) protein (408aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
chorismate synthase (EC:4.2.3.5)
Chorismate synthase n=1 Tax=Halosimplex carlsbadense 2-9-1 RepID=M0CNX5_9EURY
sw_6_scaffold_18_29
unknown

Not on your lists

comp(25223..25432)
DNA (210bp) protein (70aa)

This feature has no annotations

sw_6_scaffold_18_30
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25493..26230
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQG2_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI49634.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
Displaying items 1-30 of 51 in total

View Taxonomy