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sw_6_scaffold_1810

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_1810_1
unknown

Not on your lists

comp(3..107)
DNA (105bp) protein (35aa)

This feature has no annotations

sw_6_scaffold_1810_2
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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134..1126
DNA (993bp) protein (331aa)
2-phospho-L-lactate transferase {ECO:0000256|HAMAP-Rule:MF_01257}; EC=2.7.8.28 {ECO:0000256|HAMAP-Rule:MF_01257};; LPPG:FO 2-phospho-L-lactate transferase {ECO:0000256|HAMAP-Rule:MF_01257}; TaxID=4859
2-phospho-L-lactate transferase n=1 Tax=Halomicrobium katesii RepID=UPI00037EC7C2
LPPG:FO 2-phospho-L-lactate transferase
sw_6_scaffold_1810_3
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1126..1863
DNA (738bp) protein (246aa)
Dihydropyrimidine dehydrogenase n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0MY87_9EURY
Dihydropyrimidine dehydrogenase {ECO:0000313|EMBL:EMA50692.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodi
tRNA-dihydrouridine synthase-like protein
sw_6_scaffold_1810_4
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1860..2693
DNA (834bp) protein (278aa)
citG; triphosphoribosyl-dephospho-CoA synthase (EC:2.7.8.25)
Triphosphoribosyl-dephospho-CoA synthase {ECO:0000313|EMBL:CCQ37583.1}; EC=2.4.2.52 {ECO:0000313|EMBL:CCQ37583.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobac
Triphosphoribosyl-dephospho-CoA synthase n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XT49_NATM8
sw_6_scaffold_1810_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2690..3298
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L8L6_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA29937.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_6_scaffold_1810_6
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3324..4604)
DNA (1281bp) protein (427aa)
MiaB-like tRNA modifying enzyme n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IQA6_NATPD
hypothetical protein
MiaB-like tRNA modifying enzyme {ECO:0000313|EMBL:CAI49690.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas phara
sw_6_scaffold_1810_7
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4691..5320)
DNA (630bp) protein (210aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114};; 2-deoxy-D-ribose 5-phosphate aldolase {E
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Halobacterium sp. DL1 RepID=G4IFB2_9EURY
sw_6_scaffold_1810_8
unknown

Not on your lists

5330..5512
DNA (183bp) protein (61aa)

This feature has no annotations

sw_6_scaffold_1810_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5677..6495
DNA (819bp) protein (273aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N6L8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA53557.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
DUF63 family protein
sw_6_scaffold_1810_10
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

6533..7393
DNA (861bp) protein (287aa)
Sugar kinase {ECO:0000313|EMBL:CAP14350.1}; EC=2.7.1.- {ECO:0000313|EMBL:CAP14350.1};; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" s
Sugar kinase n=2 Tax=Halobacterium salinarum RepID=B0R6I1_HALS3
suk; sugar kinase
sw_6_scaffold_1810_11
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7410..7700)
DNA (291bp) protein (97aa)
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LWG9_9EURY
Putative transcriptional regulator containing an HTH domain fused to a Zn-ribbon {ECO:0000313|EMBL:EMA36704.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacter
hypothetical protein
sw_6_scaffold_1810_12
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7707..7952
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LJK8_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA33716.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_6_scaffold_1810_13
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8010..9299)
DNA (1290bp) protein (430aa)
Transposase, IS605 OrfB family protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0G940_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELZ68007.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahove
transposase, IS605 OrfB family, central region
sw_6_scaffold_1810_14
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9304..9447)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9YSW8_NATP1
Uncharacterized protein {ECO:0000313|EMBL:KKF39048.1}; TaxID=2248 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovorum.;"
hypothetical protein
Displaying 14 items

View Taxonomy