ggKbase home page

sw_6_scaffold_189

Search features with annotation key words

Displaying 20 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_189_1
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9..1907
DNA (1899bp) protein (633aa)
Type II/IV secretion system transmembrane protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUL0_NATPD
transmembrane protein (type II secretion system proteins TadC)
Type II/IV secretion system transmembrane protein {ECO:0000313|EMBL:CAI48170.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
sw_6_scaffold_189_2
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1904..2638
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QX96_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90899.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
sw_6_scaffold_189_3
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2635..3075
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JH97_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60796.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_6_scaffold_189_4
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3072..3737
DNA (666bp) protein (222aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IIA4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG03050.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_6_scaffold_189_5
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3730..4134
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IUL4_NATPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAI48166.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaonis (st
sw_6_scaffold_189_6
Halonotius sp. J07HN4, Halonotius, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4250..5146)
DNA (897bp) protein (299aa)
Putative hydrolase or acyltransferases (Alpha/beta hydrolase superfamily) n=1 Tax=Halonotius sp. J07HN4 RepID=U1PD71_9EURY
Putative hydrolase or acyltransferases (Alpha/beta hydrolase superfamily) {ECO:0000313|EMBL:ERH07994.1}; TaxID=1070774 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Hal
alpha/beta hydrolase fold protein
sw_6_scaffold_189_7
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5153..6499)
DNA (1347bp) protein (449aa)
Monooxygenase FAD-binding protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0DQM1_9EURY
Monooxygenase FAD-binding protein {ECO:0000313|EMBL:ELZ37780.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum saccharovo
monooxygenase FAD-binding protein
sw_6_scaffold_189_8
unknown

Not on your lists

comp(6556..7419)
DNA (864bp) protein (288aa)

This feature has no annotations

sw_6_scaffold_189_9
unknown

Not on your lists

comp(7386..7514)
DNA (129bp) protein (43aa)

This feature has no annotations

sw_6_scaffold_189_10
Haloarcula marismortui, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7727..8632)
DNA (906bp) protein (302aa)
Acetamidase/formamidase family protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5UWY2_HALMA
acetamidase/formamidase family protein
Acetamidase/formamidase family protein {ECO:0000313|EMBL:AAV48221.1}; TaxID=272569 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula ma
sw_6_scaffold_189_11
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8759..9862
DNA (1104bp) protein (368aa)
livH; ABC-type branched-chain amino acid transport system, permease I; K01997 branched-chain amino acid transport system permease protein id=24614804 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
ABC-type branched-chain amino acid transport system, permease I {ECO:0000313|EMBL:ESP88704.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatu
livH; ABC-type branched-chain amino acid transport system, permease I
sw_6_scaffold_189_12
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9859..11199
DNA (1341bp) protein (447aa)
livM; ABC-type branched-chain amino acid transport system, permease II; K01998 branched-chain amino acid transport system permease protein id=24614803 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
ABC-type branched-chain amino acid transport system, permease II {ECO:0000313|EMBL:ESP88703.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidat
livM; ABC-type branched-chain amino acid transport system, permease II
sw_6_scaffold_189_13
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11196..12020
DNA (825bp) protein (275aa)
livG; ABC-type branched-chain amino acid transport systems, ATP-binding protein I; K01995 branched-chain amino acid transport system ATP-binding protein id=24614802 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
ABC-type branched-chain amino acid transport systems, ATP-binding protein I {ECO:0000313|EMBL:ESP88702.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriacea
amino acid/amide ABC transporter ATP-binding protein 1, haat family
sw_6_scaffold_189_14
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12017..12721
DNA (705bp) protein (235aa)
ABC transporter n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4GU95_9EURY
ABC transporter {ECO:0000313|EMBL:ESP88701.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrr
ABC transporter-like protein
sw_6_scaffold_189_15
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12772..14043)
DNA (1272bp) protein (424aa)
livJ; ABC-type branched-chain amino acid transport systems, substrate-binding protein
livJ; ABC-type branched-chain amino acid transport systems, substrate-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein id=24614800 bin=Halobonum_tyrrellensis species=Candidatus Halobonum tyrrellensis genus=Candidatus Halobonum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halobonum_tyrrellensis
ABC-type transport system periplasmic substrate-binding protein (Probable substrate branched-chain amino acids) {ECO:0000313|EMBL:CAJ52318.1}; TaxID=362976 species="Archaea; Euryarchaeota; Halobacteri
sw_6_scaffold_189_16
unknown

Not on your lists

14665..15285
DNA (621bp) protein (207aa)

This feature has no annotations

sw_6_scaffold_189_17
unknown

Not on your lists

15427..15885
DNA (459bp) protein (153aa)

This feature has no annotations

sw_6_scaffold_189_18
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15723..16640)
DNA (918bp) protein (306aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Natronococcus occultus SP4 RepID=L0JVF0_9EURY
transposase, IS605 OrfB family, central region
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:AGB37007.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronoc
sw_6_scaffold_189_19
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(16612..16998)
DNA (387bp) protein (129aa)
Transposase, IS605 OrfB family protein n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0H878_9EURY
Transposase, IS605 OrfB family protein {ECO:0000313|EMBL:ELZ79937.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax gibbons
transposase, IS605 OrfB family
sw_6_scaffold_189_20
Natronococcus occultus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(17008..17154)
DNA (147bp) protein (49aa)
Uncharacterized protein n=1 Tax=Natronococcus occultus SP4 RepID=L0JWG5_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB37116.1}; TaxID=694430 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus occultus SP4.;"
Displaying 20 items

View Taxonomy