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sw_6_scaffold_192

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_192_1
Halorubrum litoreum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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1..390
DNA (390bp) protein (130aa)
LPS biosynthesis protein n=1 Tax=Halorubrum litoreum JCM 13561 RepID=M0NU59_9EURY
LPS biosynthesis protein {ECO:0000313|EMBL:EMA61301.1}; TaxID=1227483 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum litoreum JCM 13561.
lpb2; LPS biosynthesis protein
sw_6_scaffold_192_2
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(869..1957)
DNA (1089bp) protein (363aa)
Group 1 glycosyl transferase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KF70_HALAR
Group 1 glycosyl transferase {ECO:0000313|EMBL:EMA18470.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula argentinens
group 1 glycosyl transferase
sw_6_scaffold_192_3
unknown

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2098..3288
DNA (1191bp) protein (397aa)

This feature has no annotations

sw_6_scaffold_192_4
RLO_Nitrospinae_45_22, Nitrospinae, Bacteria

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comp(4212..5366)
DNA (1155bp) protein (385aa)
Glycosyl transferase group 1 protein n=1 Tax=Natrialba aegyptia DSM 13077 RepID=M0AXC7_9EURY
ytcC; putative glucosyltransferase YtcC Tax=RIFCSPLOWO2_12_FULL_Nitrospinae_45_22_curated
hypothetical protein
sw_6_scaffold_192_5
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5356..6771)
DNA (1416bp) protein (472aa)
Sulfatase n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P385_HALMD
sulfatase
Sulfatase {ECO:0000313|EMBL:ACV47557.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobium mukohataei (strain ATCC 7
sw_6_scaffold_192_6
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6814..7683)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZKL8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61250.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
wcaA; Glycosyltransferase
sw_6_scaffold_192_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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7831..9687
DNA (1857bp) protein (619aa)
ABC transporter, ATP-binding/permease protein {ECO:0000313|EMBL:CCQ33135.1}; ATP-binding cassette subfamily B bacterial MsbA protein {ECO:0000313|EMBL:ERJ05393.1}; EC=3.6.3.- {ECO:0000313|EMBL:ERJ0539
ABC transporter, ATP-binding/permease protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGC1_9EURY
ABC transporter, ATP-binding/permease protein
sw_6_scaffold_192_8
Halococcus hamelinensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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9626..10813
DNA (1188bp) protein (396aa)
Glycosyl transferase, group 1 n=1 Tax=Halococcus hamelinensis 100A6 RepID=M0LTJ2_9EURY
Glycosyl transferase, group 1 {ECO:0000313|EMBL:EMA36877.1}; TaxID=1132509 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus hamelinens
hypothetical protein
sw_6_scaffold_192_9
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(10818..11648)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W466_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGN00942.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.
sw_6_scaffold_192_10

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comp(11648..13162)
DNA (1515bp) protein (505aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=halophilic archaeon DL31 RepID=G2MJX9_9ARCH
type I phosphodiesterase/nucleotide pyrophosphatase
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AEN05332.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_192_11
Halorubrum lipolyticum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(13366..14394)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Halorubrum sp. T3 RepID=UPI000365AFAF
Nucleoside-diphosphate-sugar epimerase (UDP-glucose 4-epimerase) {ECO:0000313|EMBL:EMA63041.1}; TaxID=1227482 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;
nucleoside-diphosphate-sugar epimerase
sw_6_scaffold_192_12
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14441..15877)
DNA (1437bp) protein (479aa)
Asparagine synthase protein {ECO:0000313|EMBL:ERJ06862.1}; EC=6.3.5.4 {ECO:0000313|EMBL:ERJ06862.1};; Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:CCQ32999.1}
Asparagine synthase protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJ34_9EURY
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase
sw_6_scaffold_192_13
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16139..16537
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D0T1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29035.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
sw_6_scaffold_192_14
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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16540..17064
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D0M8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ29036.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
hypothetical protein
Displaying 14 items

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