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sw_6_scaffold_212

Search features with annotation key words

Displaying 21 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_212_1
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3..461)
DNA (459bp) protein (153aa)
hypothetical protein id=24634591 bin=Haloquadratum_walsbyi_J07HQW2 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_walsbyi_J07HQW2
Uncharacterized protein {ECO:0000313|EMBL:ERG97394.1}; TaxID=1238425 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_6_scaffold_212_2
unknown

Not on your lists

comp(968..1114)
DNA (147bp) protein (49aa)

This feature has no annotations

sw_6_scaffold_212_3
Anaerotruncus colihominis, Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1214..2359)
DNA (1146bp) protein (382aa)
Polyamine-transporting ATPase {ECO:0000256|SAAS:SAAS00083160}; EC=3.6.3.31 {ECO:0000256|SAAS:SAAS00083160};; TaxID=445972 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ana
Polyamine ABC transporter, ATP-binding protein n=1 Tax=Anaerotruncus colihominis DSM 17241 RepID=B0PGV8_9FIRM
spermidine/putrescine ABC transporter ATPase
sw_6_scaffold_212_4
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2551..3627
DNA (1077bp) protein (359aa)
Spermidine/putrescine ABC transporter n=1 Tax=Halobacterium sp. DL1 RepID=G4IIP4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05158.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
spermidine/putrescine ABC transporter
sw_6_scaffold_212_5
alpha proteobacterium BAL199, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3632..4501
DNA (870bp) protein (290aa)
ABC spermidine/putrescine transporter, inner membrane subunit n=1 Tax=alpha proteobacterium BAL199 RepID=A8U1A9_9PROT
ABC spermidine/putrescine transporter, inner membrane subunit {ECO:0000313|EMBL:EDP61849.1}; TaxID=331869 species="Bacteria; Proteobacteria; Alphaproteobacteria.;" source="alpha proteobacterium BAL199
putative polyamine ABC transporter, permease protein
sw_6_scaffold_212_6
Rhizobium freirei, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4501..5292
DNA (792bp) protein (264aa)
ABC transporter, permease protein n=1 Tax=Rhizobium freirei PRF 81 RepID=N6U3R2_9RHIZ
ABC transporter, permease protein {ECO:0000313|EMBL:ENN84953.1}; TaxID=363754 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobiu
potI; putrescine ABC transporter permease
sw_6_scaffold_212_7
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5296..5916
DNA (621bp) protein (207aa)
pyrrolidone-carboxylate peptidase (EC:3.4.19.3)
Pyrrolidone-carboxylate peptidase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VUN5_9EURY
Pyrrolidone-carboxylate peptidase {ECO:0000313|EMBL:ELY40741.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibete
sw_6_scaffold_212_8
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5913..6719)
DNA (807bp) protein (269aa)
creatinine amidohydrolase (EC:3.5.2.10)
Creatinine amidohydrolase n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0EA10_9EURY
Creatinine amidohydrolase {ECO:0000313|EMBL:ELZ44631.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284
sw_6_scaffold_212_9

Not on your lists

comp(6991..8322)
DNA (1332bp) protein (444aa)
N-methylhydantoinase B/acetone carboxylase, alpha subunit n=1 Tax=uncultured archaeon A07HN63 RepID=V4Y9S5_9ARCH
N-methylhydantoinase B/acetone carboxylase, alpha subunit {ECO:0000313|EMBL:ESS09596.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
5-oxoprolinase
sw_6_scaffold_212_10
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8388..8855)
DNA (468bp) protein (156aa)
5-oxoprolinase (EC:3.5.2.9)
5-oxoprolinase (ATP-hydrolyzing) {ECO:0000313|EMBL:AEH38023.1}; EC=3.5.2.9 {ECO:0000313|EMBL:AEH38023.1};; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halo
5-oxoprolinase (ATP-hydrolyzing) n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8D8V9_HALXS
sw_6_scaffold_212_11
unknown

Not on your lists

8909..9124
DNA (216bp) protein (72aa)

This feature has no annotations

sw_6_scaffold_212_12
Halostagnicola larsenii, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9121..10338)
DNA (1218bp) protein (406aa)
N-methylhydaintoinase (ATP-hydrolyzing) A n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUY8_9EURY
5-oxoprolinase
5-oxoprolinase {ECO:0000313|EMBL:AHF99175.1}; TaxID=797299 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola larsenii XH-48.;"
sw_6_scaffold_212_13
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10515..11060
DNA (546bp) protein (182aa)
CopG family ribbon-helix-helix transcription regulator n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAR7_HALMT
CopG family ribbon-helix-helix transcription regulator
CopG family ribbon-helix-helix transcription regulator {ECO:0000313|EMBL:AFK21327.1}; CopG family transcriptional regulator {ECO:0000313|EMBL:AHZ24584.1}; TaxID=523841 species="Archaea; Euryarchaeota;
sw_6_scaffold_212_14
unknown

Not on your lists

comp(11018..11266)
DNA (249bp) protein (83aa)

This feature has no annotations

sw_6_scaffold_212_15
unknown

Not on your lists

11269..11943
DNA (675bp) protein (225aa)

This feature has no annotations

sw_6_scaffold_212_16
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11968..12585)
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LW56_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58446.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_6_scaffold_212_17
Halorubrum terrestre, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12681..12902
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Halorubrum terrestre JCM 10247 RepID=M0DSR0_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ38510.1}; TaxID=1227486 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum terrestre JCM 10247.
hypothetical protein
sw_6_scaffold_212_18
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13011..15239
DNA (2229bp) protein (743aa)
Uncharacterized protein n=1 Tax=Haloquadratum walsbyi (strain DSM 16854 / JCM 12705 / C23) RepID=G0LN51_HALWC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCC41521.1}; TaxID=768065 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi (strain
sw_6_scaffold_212_19
unknown

Not on your lists

15193..15411
DNA (219bp) protein (73aa)

This feature has no annotations

sw_6_scaffold_212_20
Halostagnicola sp. A56, Halostagnicola, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(15623..16192)
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4ICQ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KDE56788.1}; TaxID=1495067 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halostagnicola.;" source="Halostagnicola sp. A56.;"
conserved hypothetical protein (DUF45)
sw_6_scaffold_212_21
unknown

Not on your lists

comp(16189..16323)
DNA (135bp) protein (45aa)

This feature has no annotations

Displaying 21 items

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