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sw_6_scaffold_271

Search features with annotation key words

Displaying items 1-30 of 44 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_271_1
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1..423
DNA (423bp) protein (141aa)
Uncharacterized protein n=3 Tax=Archaea RepID=B9LVF8_HALLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACM58671.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_6_scaffold_271_2
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

461..796
DNA (336bp) protein (112aa)
Uncharacterized protein n=2 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JSV5_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33732.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_271_3
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

893..2305
DNA (1413bp) protein (471aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate is
leuC; 3-isopropylmalate dehydratase large subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase large subunit n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0DYV1_9EURY
sw_6_scaffold_271_4
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2305..2913
DNA (609bp) protein (203aa)
leuD; 3-isopropylmalate dehydratase small subunit (EC:4.2.1.33)
3-isopropylmalate dehydratase small subunit n=2 Tax=Halorubrum RepID=M0EKZ8_9EURY
3-isopropylmalate dehydratase small subunit {ECO:0000313|EMBL:ELZ47079.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum
sw_6_scaffold_271_5
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2947..3597)
DNA (651bp) protein (217aa)
Putative DNA binding protein n=1 Tax=halophilic archaeon J07HX64 RepID=U1QWJ4_9EURY
Putative DNA binding protein {ECO:0000313|EMBL:ERH10267.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
DNA binding protein
sw_6_scaffold_271_6
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(3766..4857)
DNA (1092bp) protein (364aa)
(R)-citramalate synthase; K01649 2-isopropylmalate synthase [EC:2.3.3.13] id=24649176 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
(R)-citramalate synthase (EC:2.3.1.182)
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:ERH10266.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_6_scaffold_271_7
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4858..6075)
DNA (1218bp) protein (406aa)
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N9J8_9EURY
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:EMA53330.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" sourc
L-carnitine dehydratase/bile acid-inducible protein F
sw_6_scaffold_271_8
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6542..7192)
DNA (651bp) protein (217aa)
entB_3; homolog 1 to N-carbamoylsarcosine amidase (EC:3.5.1.59)
Nicotinamidase-like amidase n=1 Tax=halophilic archaeon J07HX64 RepID=U1PJH6_9EURY
Nicotinamidase-like amidase {ECO:0000313|EMBL:ERH10264.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
sw_6_scaffold_271_9
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7232..9100)
DNA (1869bp) protein (623aa)
hyuB_2; N-methylhydantoinase (ATP-hydrolyzing) B 2 (EC:3.5.2.14); K01474 N-methylhydantoinase B [EC:3.5.2.14] id=24646087 bin=halophilic_archaeon_J07HX64 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=halophilic_archaeon_J07HX64
hyuB_2; N-methylhydantoinase (ATP-hydrolyzing) B 2 (EC:3.5.2.14)
N-methylhydantoinase B/acetone carboxylase, alpha subunit {ECO:0000313|EMBL:ERH10263.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07
sw_6_scaffold_271_10
Halococcus salifodinae, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9097..11160)
DNA (2064bp) protein (688aa)
hyuA_2; N-methylhydantoinase (ATP-hydrolyzing) A 2 (EC:3.5.2.14)
N-methylhydantoinase A 2 n=1 Tax=Halococcus salifodinae DSM 8989 RepID=M0N5W6_9EURY
N-methylhydantoinase A 2 {ECO:0000313|EMBL:EMA53327.1}; TaxID=1227456 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus salifodinae DSM
sw_6_scaffold_271_11
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11419..11958
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJH1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05535.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_6_scaffold_271_12
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12034..12339
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DE38_HALXS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEH39314.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1
sw_6_scaffold_271_13
Natrinema gari, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12536..13081
DNA (546bp) protein (182aa)
Uncharacterized protein n=1 Tax=Natrinema gari JCM 14663 RepID=L9YQW2_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY75862.1}; TaxID=1230459 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema gari JCM 14663.;"
sw_6_scaffold_271_14
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13156..13728
DNA (573bp) protein (191aa)
Uncharacterized protein n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FQA9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ62241.1}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium ATCC 700
hypothetical protein rbh
sw_6_scaffold_271_15
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13742..14353)
DNA (612bp) protein (204aa)
Mrr restriction system protein homolog n=2 Tax=Halarchaeum acidiphilum RepID=U2YFY7_9EURY
Mrr restriction system protein homolog {ECO:0000313|EMBL:GAD53091.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum acidiphilum
restriction endonuclease
sw_6_scaffold_271_16
Halorubrum arcis, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14538..15245
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=Halorubrum arcis JCM 13916 RepID=M0PV84_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA72775.1}; TaxID=1230455 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum arcis JCM 13916.;"
sw_6_scaffold_271_17
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15193..15594
DNA (402bp) protein (134aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IJG8_9EURY
Uncharacterized protein {ECO:0000313|EMBL:AHG05533.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
hypothetical protein
sw_6_scaffold_271_18
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15618..15893
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L521_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA27509.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_6_scaffold_271_19
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15943..16164
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JRR4_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33929.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_271_20
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16218..16517
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L0JSZ4_NATP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGB33928.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 1
sw_6_scaffold_271_21
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

16674..17360
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E382_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40804.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
sw_6_scaffold_271_22
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17360..17515
DNA (156bp) protein (52aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGX1_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ06544.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_6_scaffold_271_23
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17512..18048
DNA (537bp) protein (179aa)
Uncharacterized protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L516_HALJP
Uncharacterized protein {ECO:0000313|EMBL:EMA27504.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula japonica DSM 613
hypothetical protein
sw_6_scaffold_271_24
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

18205..19206
DNA (1002bp) protein (334aa)
Uncharacterized protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0E1H6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ40807.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 1
hypothetical protein
sw_6_scaffold_271_25
unknown

Not on your lists

comp(19353..19643)
DNA (291bp) protein (97aa)

This feature has no annotations

sw_6_scaffold_271_26
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(19727..19942)
DNA (216bp) protein (72aa)
DNA-directed RNA polymerase subunit E'' protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2FE36_9EURY
DNA-directed RNA polymerase subunit E'' protein {ECO:0000313|EMBL:ERJ06549.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Ha
hypothetical protein
sw_6_scaffold_271_27
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20041..20970
DNA (930bp) protein (310aa)
Uncharacterized protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2F8X9_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ06550.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_6_scaffold_271_28
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21101..21652)
DNA (552bp) protein (184aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PGW4_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERJ06551.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4
sw_6_scaffold_271_29
Natrinema pallidum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(21731..22129)
DNA (399bp) protein (133aa)
Uncharacterized protein n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9Z1D4_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY79726.1}; TaxID=1227495 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pallidum DSM 3751.;"
Sugar-specific transcriptional regulator TrmB
sw_6_scaffold_271_30
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22531..23349
DNA (819bp) protein (273aa)
Zinc finger SWIM domain-containing protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L323_HALJP
Zinc finger SWIM domain-containing protein {ECO:0000313|EMBL:EMA27488.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcu
zinc finger SWIM domain protein
Displaying items 1-30 of 44 in total

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