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sw_6_scaffold_3311

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_3311_1
Halorubrum lacusprofundi, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2..370)
DNA (369bp) protein (123aa)
ABC transporter related n=1 Tax=Halorubrum lacusprofundi (strain ATCC 49239 / DSM 5036 / JCM 8891 / ACAM 34) RepID=B9LT87_HALLT
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACM58059.1}; TaxID=416348 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum lacusprofundi (strain
sw_6_scaffold_3311_2
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(373..1338)
DNA (966bp) protein (322aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PA26_9EURY
Binding-protein-dependent transporters inner membrane component {ECO:0000313|EMBL:EMA66703.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;"
binding-protein-dependent transporters inner membrane component
sw_6_scaffold_3311_3
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(1335..2165)
DNA (831bp) protein (277aa)
Sugar ABC transporter permease n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PAA3_9EURY
Sugar ABC transporter permease {ECO:0000313|EMBL:EMA67062.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 1
binding-protein-dependent transporters inner membrane component
sw_6_scaffold_3311_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(2178..2315)
DNA (138bp) protein (46aa)
Extracellular solute-binding protein family 1 n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0P9I6_9EURY
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:EMA67063.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubru
sugar ABC transporter substrate-binding protein
sw_6_scaffold_3311_5
unknown

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comp(2312..3649)
DNA (1338bp) protein (446aa)

This feature has no annotations

sw_6_scaffold_3311_6
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3784..4221
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PC08_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA67064.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum kocurii JCM 14978.;"
hypothetical protein
sw_6_scaffold_3311_7
Halorubrum aidingense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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4265..4849
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Halorubrum aidingense JCM 13560 RepID=M0PAX3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA66699.1}; TaxID=1230454 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum aidingense JCM 13560
hypothetical protein
sw_6_scaffold_3311_8
Haloarcula argentinensis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5033..5893)
DNA (861bp) protein (287aa)
Aldo/keto reductase family oxidoreductase n=1 Tax=Haloarcula argentinensis DSM 12282 RepID=M0KXJ0_HALAR
Aldo/keto reductase family oxidoreductase {ECO:0000313|EMBL:EMA24470.1}; TaxID=1230451 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcul
aldo/keto reductase
sw_6_scaffold_3311_9
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(5942..7816)
DNA (1875bp) protein (625aa)
TrkA-N domain-containing protein n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9WCJ3_9EURY
TrkA-N domain-containing protein {ECO:0000313|EMBL:ELY47072.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum bangens
NhaP-type Na+(K+)/H+ antiporter
sw_6_scaffold_3311_10
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8045..8650)
DNA (606bp) protein (202aa)
TrkA-N domain protein n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0EI87_9EURY
TrkA-N domain protein {ECO:0000313|EMBL:ELZ46119.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californiensis DSM 192
TrkA-N domain-containing protein
sw_6_scaffold_3311_11
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8613..9536)
DNA (924bp) protein (308aa)
Trk active potasium channel n=2 Tax=Haloarcula hispanica RepID=G0HTE8_HALHT
trk; trk active potasium channel
Trk active potasium channel {ECO:0000313|EMBL:AEM58514.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (st
sw_6_scaffold_3311_12
Syntrophothermus lipocalidus, Syntrophothermus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9619..10071)
DNA (453bp) protein (151aa)
Uncharacterized protein n=1 Tax=Syntrophothermus lipocalidus (strain DSM 12680 / TGB-C1) RepID=D7CN85_SYNLT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADI02170.1}; TaxID=643648 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophothermus.;" source="Syntrophothermus lipocali
sw_6_scaffold_3311_13
CG_Arma_01, Armatimonadetes, Bacteria

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comp(10304..10894)
DNA (591bp) protein (197aa)
Pyrrolo-quinoline quinone n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D0M3_9EURY
cell surface protein/lipoprotein Tax=CG_Arma_01
PQQ repeat protein
Displaying 13 items

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