ggKbase home page

sw_6_scaffold_348

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_348_1
Cucumis sativus, Cucumis, Cucurbitales, rosids, Streptophyta, Viridiplantae

Not on your lists

comp(1..330)
DNA (330bp) protein (110aa)
Transporter, small conductance mechanosensitive ion channel MscS family protein n=1 Tax=Corynebacterium matruchotii ATCC 14266 RepID=E0DHW7_9CORY
Ser/Thr phosphatase
Uncharacterized protein {ECO:0000313|EMBL:KGN63188.1}; TaxID=3659 species="Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
sw_6_scaffold_348_2
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(378..1664)
DNA (1287bp) protein (429aa)
Integrase family protein n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W932_9EURY
integrase family protein
Integrase family protein {ECO:0000313|EMBL:AGN01154.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1
sw_6_scaffold_348_3
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

2075..3502
DNA (1428bp) protein (476aa)
sdhA; succinate dehydrogenase, subunit A (flavoprotein) (EC:1.3.99.1)
Succinate dehydrogenase subunit A (Flavoprotein) n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INS9_NATPD
Succinate dehydrogenase subunit A {ECO:0000313|EMBL:CAI50223.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
sw_6_scaffold_348_4
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

3769..4953
DNA (1185bp) protein (395aa)
Glucose-1-phosphate thymidylyltransferase / Nucleotidyl transferase n=2 Tax=Haloarcula hispanica RepID=G0HT74_HALHT
rffH2; glucose-1-phosphate thymidylyltransferase/Nucleotidyl transferase
Glucose-1-phosphate thymidylyltransferase / Nucleotidyl transferase {ECO:0000313|EMBL:AEM57290.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloar
sw_6_scaffold_348_5
Haloferax prahovense, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5077..5271
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Haloferax prahovense DSM 18310 RepID=M0GHU9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ71790.1}; TaxID=1227461 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax prahovense DSM 18310.;
hypothetical protein
sw_6_scaffold_348_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5263..5643)
DNA (381bp) protein (127aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XNA6_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ35370.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_6_scaffold_348_7
Halomicrobium mukohataei, Halomicrobium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

5726..8044
DNA (2319bp) protein (773aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Halomicrobium mukohataei (strain ATCC 700874 / DSM 12286 / JCM 9738 / NCIMB 13541) RepID=C7P3W7_HALMD
DEAD/DEAH box helicase domain protein {ECO:0000313|EMBL:ACV47789.1}; TaxID=485914 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halomicrobium.;" source="Halomicrobi
DEAD/DEAH box helicase
sw_6_scaffold_348_8
unknown

Not on your lists

comp(8041..8178)
DNA (138bp) protein (46aa)

This feature has no annotations

sw_6_scaffold_348_9
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(8223..9815)
DNA (1593bp) protein (531aa)
acs5; acyl-CoA synthetase (EC:6.2.1.-)
AMP-dependent synthetase and ligase n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N305_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:EMA51913.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thai
sw_6_scaffold_348_10
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10034..10963
DNA (930bp) protein (310aa)
arsA3; ArsA family ATPase (EC:3.6.-.-)
Arsenite-activated ATPase ArsA n=1 Tax=Haloquadratum walsbyi J07HQW1 RepID=U1MQE6_9EURY
Arsenite-activated ATPase ArsA {ECO:0000313|EMBL:ERG92259.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi
sw_6_scaffold_348_11
Natronorubrum bangense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10979..11635)
DNA (657bp) protein (219aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Natronorubrum bangense JCM 10635 RepID=L9W9S3_9EURY
Haloacid dehalogenase-like hydrolase {ECO:0000313|EMBL:ELY46245.1}; TaxID=1227500 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum ban
haloacid dehalogenase-like hydrolase
sw_6_scaffold_348_12
unknown

Not on your lists

11715..11954
DNA (240bp) protein (80aa)

This feature has no annotations

sw_6_scaffold_348_13
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(11991..13361)
DNA (1371bp) protein (457aa)
Putative efflux protein, MATE family n=1 Tax=halophilic archaeon J07HB67 RepID=U1QW33_9EURY
Putative efflux protein, MATE family {ECO:0000313|EMBL:ERH11548.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
norM; MATE efflux family protein
sw_6_scaffold_348_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(13609..14106)
DNA (498bp) protein (166aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3EW05_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN58962.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
pai2; sporulation regulator-like protein
sw_6_scaffold_348_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(14103..14903)
DNA (801bp) protein (267aa)
pgk; phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000255|HAMAP-Rule:MF_00145}; EC=2.7.2.3 {ECO:0000255|HAMAP-Rule:MF_00145};; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae;
Phosphoglycerate kinase n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PGK_NATPD
Displaying 15 items

View Taxonomy