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sw_6_scaffold_395

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_395_1

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comp(2..691)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=halophilic archaeon DL31 RepID=G2MLU2_9ARCH
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEN05769.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_395_2
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(869..1612)
DNA (744bp) protein (248aa)
DNA polymerase sliding clamp n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=PCNA_NATPD
pcn; DNA polymerase sliding clamp
DNA polymerase sliding clamp {ECO:0000255|HAMAP-Rule:MF_00317}; Proliferating cell nuclear antigen homolog {ECO:0000255|HAMAP-Rule:MF_00317}; Short=PCNA {ECO:0000255|HAMAP-Rule:MF_00317};; TaxID=34878
sw_6_scaffold_395_3
Halopiger xanaduensis, Halopiger, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(1735..2745)
DNA (1011bp) protein (337aa)
Replication factor C n=1 Tax=Halopiger xanaduensis (strain DSM 18323 / JCM 14033 / SH-6) RepID=F8DBA6_HALXS
Replication factor C
Replication factor C {ECO:0000313|EMBL:AEH35882.1}; TaxID=797210 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Halopiger.;" source="Halopiger xanaduensis (strain DSM 1832
sw_6_scaffold_395_4
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(2807..5245)
DNA (2439bp) protein (813aa)
Helicase c2 n=1 Tax=Candidatus Halobonum tyrrellensis G22 RepID=V4HAA2_9EURY
Helicase c2 {ECO:0000313|EMBL:ESP87640.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum tyrrelle
DNA helicase, rad3
sw_6_scaffold_395_5
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5677..5886)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=halophilic archaeon J07HB67 RepID=U1R041_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ERH11657.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_6_scaffold_395_6
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(5974..6348)
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XLJ6_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ37838.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_6_scaffold_395_7
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(6397..6936)
DNA (540bp) protein (180aa)
Cupin 2 barrel domain protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IU06_NATPD
hypothetical protein
Cupin 2 barrel domain protein {ECO:0000313|EMBL:CAI48377.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pharaon
sw_6_scaffold_395_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(6967..7443)
DNA (477bp) protein (159aa)
Cupin n=1 Tax=Halosarcina pallida JCM 14848 RepID=M0D898_9EURY
Cupin {ECO:0000313|EMBL:ELZ30384.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum JCM 14848.;"
Cupin 2 barrel domain-containing protein
sw_6_scaffold_395_9
Haloterrigena salina, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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7584..9527
DNA (1944bp) protein (648aa)
histidine kinase n=1 Tax=Halobiforma lacisalsi RepID=UPI00026323BF
Histidine kinase {ECO:0000313|EMBL:ELZ18467.1}; TaxID=1227488 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena salina JCM 13891.;"
histidine kinase
sw_6_scaffold_395_10
Haloterrigena turkmenica, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9546..9998
DNA (453bp) protein (151aa)
Response regulator receiver protein n=2 Tax=Haloterrigena RepID=D2RWZ3_HALTV
response regulator receiver protein
Response regulator receiver protein {ECO:0000313|EMBL:ADB59605.1}; TaxID=543526 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena turkm
sw_6_scaffold_395_11
Haloferax sp. Arc-Hr, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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10199..11500
DNA (1302bp) protein (434aa)
XerC/D-like integrase n=1 Tax=Haloferax lucentense DSM 14919 RepID=M0GKB9_HALL2
Tyrosine recombinase XerC {ECO:0000313|EMBL:CQR49238.1}; TaxID=1476858 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sp. Arc-Hr.;"
integrase family protein rbh
sw_6_scaffold_395_12
Emiliania huxleyi virus 86, Coccolithovirus, Viruses

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comp(11574..12200)
DNA (627bp) protein (209aa)
Putative uncharacterized protein n=1 Tax=Volvox carteri RepID=D8U2G7_VOLCA
Putative membrane protein {ECO:0000313|EMBL:CAI65791.1}; TaxID=654925 species="Viruses; dsDNA viruses, no RNA stage; Phycodnaviridae; Coccolithovirus.;" source="Emiliania huxleyi virus 86 (isolate Uni
hypothetical protein
Displaying 12 items

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