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sw_6_scaffold_416

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_416_1
Natrinema pellirubrum, Natrinema, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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2..292
DNA (291bp) protein (97aa)
Transposase n=1 Tax=Natrinema pellirubrum (strain DSM 15624 / JCM 10476 / NCIMB 786) RepID=L9Y8Y3_NATP1
Transposase {ECO:0000313|EMBL:ELY69378.1}; TaxID=797303 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrinema.;" source="Natrinema pellirubrum (strain DSM 15624 / JCM 1
transposase
sw_6_scaffold_416_2
Halarchaeum acidiphilum, Halarchaeum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(386..1279)
DNA (894bp) protein (298aa)
6-phosphogluconate dehydrogenase (EC:1.1.1.44)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Halarchaeum acidiphilum MH1-52-1 RepID=U2YQU3_9EURY
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000313|EMBL:GAD51315.1}; TaxID=1261545 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae.;" source="Halarchaeum a
sw_6_scaffold_416_3

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1419..2861
DNA (1443bp) protein (481aa)
MATE efflux family protein n=1 Tax=halophilic archaeon DL31 RepID=G2MHF3_9ARCH
MATE efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AEN06548.1}; TaxID=756883 species="Archaea.;" source="halophilic archaeon DL31.;"
sw_6_scaffold_416_4

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comp(2868..3941)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HB70 RepID=V4XTI2_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS05503.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
hypothetical protein
sw_6_scaffold_416_5

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comp(3938..4930)
DNA (993bp) protein (331aa)
Periplasmic serine proteases (ClpP class) n=1 Tax=uncultured archaeon A07HB70 RepID=V4Y3C5_9ARCH
Periplasmic serine proteases (ClpP class) {ECO:0000313|EMBL:ESS05502.1}; TaxID=1412872 species="Archaea; environmental samples.;" source="uncultured archaeon A07HB70.;"
peptidase S49
sw_6_scaffold_416_6
unknown

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5104..5307
DNA (204bp) protein (68aa)

This feature has no annotations

sw_6_scaffold_416_7
Halorhabdus utahensis, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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5298..6575
DNA (1278bp) protein (426aa)
Uncharacterized protein n=1 Tax=Halorhabdus utahensis (strain DSM 12940 / JCM 11049 / AX-2) RepID=C7NQG4_HALUD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACV12907.1}; TaxID=519442 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus utahensis (stra
sw_6_scaffold_416_trna_1
unknown

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6406..6478
DNA (73bp)
transferRNA
sw_6_scaffold_416_8
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(6636..7460)
DNA (825bp) protein (275aa)
ABC-2 type transporter n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VS20_9EURY
ABC-2 type transporter {ECO:0000313|EMBL:ELY39792.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
ABC transporter permease
sw_6_scaffold_416_9
Haloterrigena thermotolerans, Haloterrigena, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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comp(7457..8578)
DNA (1122bp) protein (374aa)
ABC transporter-related protein n=1 Tax=Haloterrigena thermotolerans DSM 11522 RepID=M0BB01_9EURY
ABC transporter-related protein {ECO:0000313|EMBL:ELZ08076.1}; TaxID=1227489 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Haloterrigena.;" source="Haloterrigena thermoto
ABC-type multidrug transport system, ATPase component
sw_6_scaffold_416_10
unknown

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comp(8958..9173)
DNA (216bp) protein (72aa)

This feature has no annotations

sw_6_scaffold_416_11
Halorubrum californiense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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9208..10269
DNA (1062bp) protein (354aa)
Putative Mrr family endonuclease n=1 Tax=Halorubrum californiensis DSM 19288 RepID=M0ELY5_9EURY
Putative Mrr family endonuclease {ECO:0000313|EMBL:ELZ47404.1}; TaxID=1227465 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum californien
mrr; mrr restriction system protein
sw_6_scaffold_416_12
Haloferax larsenii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(10248..11201)
DNA (954bp) protein (318aa)
DNA adenine methylase (EC:2.1.1.72)
DNA adenine methylase n=1 Tax=Haloferax larsenii JCM 13917 RepID=M0GV56_9EURY
DNA adenine methylase {ECO:0000313|EMBL:ELZ74749.1}; TaxID=1227460 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax larsenii JCM 13917.;"
sw_6_scaffold_416_13
unknown

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11387..11554
DNA (168bp) protein (56aa)

This feature has no annotations

sw_6_scaffold_416_14
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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11741..11938
DNA (198bp) protein (66aa)
Zinc-transporting ATPase {ECO:0000313|EMBL:EJN56989.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
Displaying 15 items

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