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sw_6_scaffold_4242

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_4242_1
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(3..674)
DNA (672bp) protein (224aa)
fructose-bisphosphate aldolase (EC:4.1.2.13)
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QTG6_9EURY
2-amino-3,7-dideoxy-D-threo-hept-6-ulosonate synthase {ECO:0000256|HAMAP-Rule:MF_00960}; Short=ADH synthase {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADHS {ECO:0000256|HAMAP-Rule:MF_00960};; Short=ADT
sw_6_scaffold_4242_2
unknown

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comp(675..1283)
DNA (609bp) protein (203aa)

This feature has no annotations

sw_6_scaffold_4242_3
Halococcus saccharolyticus, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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1390..1779
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SUW9_9EURY
FAD dependent oxidoreductase {ECO:0000313|EMBL:EMA46797.1}; TaxID=1227455 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus saccharolyt
glycine/D-amino acid oxidase, deaminating
sw_6_scaffold_4242_4
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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1795..2244
DNA (450bp) protein (150aa)
N-acetyltransferase GCN5 n=1 Tax=Natronorubrum tibetense GA33 RepID=L9VHF9_9EURY
GCN5-related N-acetyltransferase
N-acetyltransferase GCN5 {ECO:0000313|EMBL:ELY36491.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.
sw_6_scaffold_4242_5
Haloarcula sp. CBA1115, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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2273..3184
DNA (912bp) protein (304aa)
tRNA methyl transferase n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0KZZ2_9EURY
tRNA methyltransferase
tRNA methyltransferase {ECO:0000313|EMBL:AJF25788.1}; TaxID=1592728 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula sp. CBA1115.;"
sw_6_scaffold_4242_6
Halorubrum hochstenium, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(3197..3490)
DNA (294bp) protein (98aa)
UPF0753 protein C467_07482 n=1 Tax=Halorubrum hochstenium ATCC 700873 RepID=M0FDZ7_9EURY
UPF0753 protein C467_07482 {ECO:0000256|HAMAP-Rule:MF_01871}; TaxID=1227481 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum hochstenium A
hypothetical protein
sw_6_scaffold_4242_7
unknown

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3749..5050
DNA (1302bp) protein (434aa)

This feature has no annotations

sw_6_scaffold_4242_8
Haloferax gibbonsii, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(5415..6416)
DNA (1002bp) protein (334aa)
ndhF; potential NADH-quinone oxidoreductase subunit 5 (EC:1.6.99.5)
pH adaptation potassium efflux system protein A n=1 Tax=Haloferax gibbonsii ATCC 33959 RepID=M0HAG5_9EURY
pH adaptation potassium efflux system protein A {ECO:0000313|EMBL:ELZ80717.1}; TaxID=1227459 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofera
sw_6_scaffold_4242_9
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7439..7855
DNA (417bp) protein (139aa)
guaD; nucleoside deaminase (cytosine deaminase, guanine deaminase) (EC:3.5.4.1 3.5.4.3); K01485 cytosine deaminase [EC:3.5.4.1]; K01487 guanine deaminase [EC:3.5.4.3] id=24630217 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
guaD3; probable nucleoside deaminase (cytosine/guanine deaminase) (EC:3.5.4.-)
Cytosine deaminase related metal-dependent hydrolase {ECO:0000313|EMBL:ERG92498.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source=
sw_6_scaffold_4242_10
Halorubrum saccharovorum, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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comp(7858..8403)
DNA (546bp) protein (182aa)
Transcriptional regulator, AsnC family protein n=1 Tax=Halorubrum saccharovorum DSM 1137 RepID=M0E605_9EURY
Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:ELZ42478.1}; TaxID=1227484 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
transcriptional regulator, AsnC family
sw_6_scaffold_4242_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(8675..9736)
DNA (1062bp) protein (354aa)
Integral membrane DUF92 protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=U2DML1_9EURY
conserved hypothetical membrane protein (DUF92)
Conserved hypothetical membrane protein (DUF92) {ECO:0000313|EMBL:CCQ32342.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Ha
sw_6_scaffold_4242_12
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9990..10505
DNA (516bp) protein (172aa)
Di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate synthase n=2 Tax=Haloarcula hispanica RepID=V5TNE4_HALHI
UDP diphosphate synthase
Di-trans,poly-cis-decaprenylcistransferase / (Z)-prenyl diphosphate synthase {ECO:0000313|EMBL:AHB66588.1}; TaxID=1417673 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriace
sw_6_scaffold_4242_13
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

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comp(10529..10693)
DNA (165bp) protein (55aa)
UPF0098 family protein n=2 Tax=Halobacterium salinarum RepID=B0R768_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAG20289.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (s
Displaying 13 items

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