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sw_6_scaffold_443

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_443_1
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(3..359)
DNA (357bp) protein (119aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00277524};; 16S rRNA
Ribosomal RNA small subunit methyltransferase G n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4M6_SALRM
gidB; methyltransferase gidB
sw_6_scaffold_443_2
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(496..2700)
DNA (2205bp) protein (735aa)
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000255|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000255|HAMAP-Rule:MF_00129}; TaxID=309807 species="Bacter
gidA; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA; K03495 tRNA uridine 5-carboxymethylaminomethyl modification enzyme id=24656870 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_6_scaffold_443_3
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(2841..3374)
DNA (534bp) protein (178aa)
hypothetical protein
hypothetical protein id=24656869 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Uncharacterized protein {ECO:0000313|EMBL:CBH22979.1}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Salinibacter.;" source="Salinibacter rube
sw_6_scaffold_443_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3374..3916)
DNA (543bp) protein (181aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
hypothetical protein id=24658185 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
sw_6_scaffold_443_5
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3928..4434)
DNA (507bp) protein (169aa)
Uncharacterized protein n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D594_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP54319.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
sw_6_scaffold_443_6
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(4581..5966)
DNA (1386bp) protein (462aa)
trmE; tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] id=24656865 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
tRNA modification GTPase MnmE {ECO:0000255|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000255|HAMAP-Rule:MF_00379};; TaxID=309807 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; R
trmE; tRNA modification GTPase TrmE
sw_6_scaffold_443_7
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(6011..7918)
DNA (1908bp) protein (636aa)
inner membrane protein oxaA
inner membrane protein oxaA; K03217 preprotein translocase subunit YidC id=24656864 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
Membrane protein insertase YidC {ECO:0000256|HAMAP-Rule:MF_01810, ECO:0000256|SAAS:SAAS00003942}; Foldase YidC {ECO:0000256|HAMAP-Rule:MF_01810}; Membrane integrase YidC {ECO:0000256|HAMAP-Rule:MF_018
sw_6_scaffold_443_8
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

comp(8172..8615)
DNA (444bp) protein (148aa)
Ribonuclease P protein component n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4L8_SALRM
hypothetical protein
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rul
sw_6_scaffold_443_9
Salinibacter ruber, Salinibacter, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists


comp(8629..8793)
DNA (165bp) protein (55aa)
Ribosomal protein L34 n=1 Tax=Salinibacter ruber (strain M8) RepID=D5H4L7_SALRM
rpmH; 50S ribosomal protein L34
50S ribosomal protein L34 {ECO:0000256|HAMAP-Rule:MF_00391, ECO:0000256|SAAS:SAAS00020245}; TaxID=761659 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Sali
sw_6_scaffold_443_trna_1
unknown

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8965..9036
DNA (72bp)
transferRNA
sw_6_scaffold_443_trna_2
unknown

Not on your lists

9150..9223
DNA (74bp)
transferRNA
sw_6_scaffold_443_10
Ignavibacterium album, Ignavibacterium, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

10106..11569
DNA (1464bp) protein (488aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI000365698E
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:AFH48709.1}; TaxID=945713 species="Bacteria; Ignavibacteriae; Ignavibacteria; Ignavibacteriales; Ignavibacteriaceae; Ignavibacterium.;" source="Ignavibacteriu
sw_6_scaffold_443_11
RBG_16_Ignavibacteria_35_7_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

11520..12998
DNA (1479bp) protein (493aa)
TonB-dependent receptor Tax=RBG_16_Ignavibacteria_35_7_curated
TonB-dependent receptor id=3924572 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
TonB-dependent receptor
sw_6_scaffold_443_12
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

13062..15251
DNA (2190bp) protein (730aa)
Fibronectin type III domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJH5_RHOM4
fibronectin type III domain-containing protein
Fibronectin type III domain protein {ECO:0000313|EMBL:ACY48633.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodotherm
sw_6_scaffold_443_13
RIFOXYD12_FULL_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

15329..16357
DNA (1029bp) protein (343aa)
ial:IALB_1001 hypothetical protein id=720752 bin=RAAC39 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=RAAC39 organism_group=Ignavibacteria
hypothetical protein Tax=RIFOXYD12_FULL_Ignavibacteria_36_8_curated
hypothetical protein
sw_6_scaffold_443_14
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

16562..17662
DNA (1101bp) protein (367aa)
TPR repeat-containing protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJH2_RHOM4
hypothetical protein
TPR repeat-containing protein {ECO:0000313|EMBL:ACY48630.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;"
sw_6_scaffold_443_15
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

Not on your lists

17783..19558
DNA (1776bp) protein (592aa)
ASPIC/UnbV domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJH9_RHOM4
ASPIC/UnbV domain-containing protein
ASPIC/UnbV domain protein {ECO:0000313|EMBL:ACY48637.1}; Flags: Precursor;; TaxID=518766 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incertae sedis; Rhodothermaceae; Rhodothermus.;" sour
sw_6_scaffold_443_16
unknown

Not on your lists

19666..20145
DNA (480bp) protein (160aa)

This feature has no annotations

sw_6_scaffold_443_17
Leptospirillum ferrooxidans, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(20208..20684)
DNA (477bp) protein (159aa)
transposase n=1 Tax=Salisaeta longa RepID=UPI0003B38027
transposase
Transposase {ECO:0000313|EMBL:BAM06993.1}; TaxID=1162668 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrooxidans (strain C2-3).;"
Displaying 19 items

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