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sw_6_scaffold_462

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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_462_1
unknown

Not on your lists

comp(3..167)
DNA (165bp) protein (55aa)

This feature has no annotations

sw_6_scaffold_462_2
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

525..776
DNA (252bp) protein (84aa)
TrmB family transcription regulator n=2 Tax=Halobacterium salinarum RepID=B0R8Q6_HALS3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAC82932.1}; Vng6082h {ECO:0000313|EMBL:AAG20769.1}; Vng6444h {ECO:0000313|EMBL:AAG21039.1}; TaxID=64091 species="Archaea; Euryarchaeota; Halobacteria; Haloba
sw_6_scaffold_462_3

Not on your lists

comp(773..1033)
DNA (261bp) protein (87aa)
transposase, IS605 OrfB family, central region id=24621426 bin=Halonotius_J07HN6 species=Halonotius sp. J07HN6 genus=Halonotius taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Halonotius_J07HN6
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:ESS09824.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
transposase, IS605 OrfB family, central region
sw_6_scaffold_462_4
Halorubrum kocurii, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1056..2312
DNA (1257bp) protein (419aa)
Transposase, IS605 OrfB family, central region n=1 Tax=Halorubrum kocurii JCM 14978 RepID=M0PHD6_9EURY
Transposase, IS605 OrfB family, central region {ECO:0000313|EMBL:EMA69333.1}; TaxID=1230456 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubr
transposase, IS605 OrfB family, central region
sw_6_scaffold_462_5
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2451..2888)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Haloarcula marismortui (strain ATCC 43049 / DSM 3752 / JCM 8966 / VKM B-1809) RepID=Q5V1X6_HALMA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ELZ31385.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidum J
sw_6_scaffold_462_6
Haloarcula amylolytica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(2881..3462)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Haloarcula amylolytica JCM 13557 RepID=M0K457_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA14919.1}; TaxID=1227452 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula amylolytica JCM
hypothetical protein
sw_6_scaffold_462_7
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

4092..5141
DNA (1050bp) protein (350aa)
Transcription factor TFIIB cyclin-related protein n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0LFS2_HALJP
Transcription factor TFIIB cyclin-related protein {ECO:0000313|EMBL:EMA31933.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="H
transcription initiation factor TFIIIB, Brf1 subunit/transcription initiation factor TFIIB
sw_6_scaffold_462_8
unknown

Not on your lists

5080..5601
DNA (522bp) protein (174aa)

This feature has no annotations

sw_6_scaffold_462_9
Natrialba hulunbeirensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(5467..6627)
DNA (1161bp) protein (387aa)
Fic family protein n=1 Tax=Natrialba hulunbeirensis JCM 10989 RepID=M0ACR4_9EURY
Fic family protein
Fic family protein {ECO:0000313|EMBL:ELY96186.1}; TaxID=1227493 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba hulunbeirensis JCM 10989.;"
sw_6_scaffold_462_10
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6767..7165)
DNA (399bp) protein (133aa)
Transposase protein n=2 Tax=Halorhabdus tiamatea SARL4B RepID=U2DIN1_9EURY
Transposase protein {ECO:0000313|EMBL:ERJ05797.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
transposase
sw_6_scaffold_462_11
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7222..7359
DNA (138bp) protein (46aa)
ParG domain containing protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PJH7_9EURY
plasmid partitioning protein-like protein
ParG domain containing protein {ECO:0000313|EMBL:ERJ05798.1}; Plasmid partitioning protein-like protein {ECO:0000313|EMBL:CCQ34267.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halo
sw_6_scaffold_462_12
Haloarcula vallismortis, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7356..8633
DNA (1278bp) protein (426aa)
IS1341-type transposase (TCE31) n=1 Tax=Haloarcula vallismortis ATCC 29715 RepID=M0JSP2_HALVA
IS1341-type transposase (TCE31) {ECO:0000313|EMBL:EMA11398.1}; TaxID=662477 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula vallismor
IS1341-type transposase (TCE31)
sw_6_scaffold_462_13
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8608..8961
DNA (354bp) protein (118aa)
YcfA family protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PPT9_9EURY
YcfA family protein {ECO:0000313|EMBL:ERJ04758.1}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SARL4B.;"
UPF0395 family protein
sw_6_scaffold_462_14
Halobacterium salinarum, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(9362..9673)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) RepID=I4IY46_HALS3
Uncharacterized protein {ECO:0000313|EMBL:CCI61347.1}; TaxID=478009 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium salinarum (
hypothetical protein
sw_6_scaffold_462_15
Natrialba chahannaoensis, Natrialba, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9790..10074
DNA (285bp) protein (95aa)
Transcription regulator n=1 Tax=Natrialba chahannaoensis JCM 10990 RepID=M0A9A1_9EURY
Transcription regulator {ECO:0000313|EMBL:ELY94951.1}; TaxID=1227492 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natrialba.;" source="Natrialba chahannaoensis JCM 10990
transcription regulator
sw_6_scaffold_462_16
Haloferax denitrificans, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

10067..10255
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Haloferax denitrificans ATCC 35960 RepID=M0JIV1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA08293.1}; TaxID=662478 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax denitrificans ATCC 3596
hypothetical protein
sw_6_scaffold_462_17
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10266..10589)
DNA (324bp) protein (108aa)
Uncharacterized protein id=24648346 bin=uncultivated_archaeon_J07ABHX6 species=unknown genus=unknown taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=uncultivated_archaeon_J07ABHX6
Uncharacterized protein {ECO:0000313|EMBL:ERH09478.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
hypothetical protein
sw_6_scaffold_462_18

Not on your lists

comp(10586..10810)
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=uncultured archaeon A07HN63 RepID=V5A340_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:ESS09865.1}; TaxID=1412873 species="Archaea; environmental samples.;" source="uncultured archaeon A07HN63.;"
hypothetical protein
sw_6_scaffold_462_19
Haloarcula californiae, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

11117..11650
DNA (534bp) protein (178aa)
Uncharacterized protein n=1 Tax=Haloarcula californiae ATCC 33799 RepID=M0JNI7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA09504.1}; TaxID=662475 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula californiae ATCC
sw_6_scaffold_462_20
unknown

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comp(12001..12075)
DNA (75bp) protein (25aa)

This feature has no annotations

Displaying 20 items

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