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sw_6_scaffold_47

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
sw_6_scaffold_47_trna_1
unknown

Not on your lists

comp(361..435)
DNA (75bp)
transferRNA
sw_6_scaffold_47_1
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(493..942)
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2N6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EMA51788.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halococcus thailandensis JC
hypothetical protein
sw_6_scaffold_47_2
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(939..1700)
DNA (762bp) protein (254aa)
gtl3; probable glycosyltransferase, type 2 (EC:2.4.-.-)
Probable glycosyltransferase, type 2 {ECO:0000313|EMBL:CCQ36073.1}; EC=2.4.-.- {ECO:0000313|EMBL:CCQ36073.1};; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteria
Probable glycosyltransferase, type 2 n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XKK7_NATM8
sw_6_scaffold_47_3
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

1947..4265
DNA (2319bp) protein (773aa)
DUF2298 family protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XPT3_NATM8
DUF2298 family protein
DUF2298 family protein {ECO:0000313|EMBL:CCQ36074.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (s
sw_6_scaffold_47_4
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(4272..6092)
DNA (1821bp) protein (607aa)
Rieske (2Fe-2S) iron-sulfur domain protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IHI6_9EURY
Ferredoxin {ECO:0000313|EMBL:AHG03301.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
ferredoxin domain-containing protein
sw_6_scaffold_47_5
Haloarcula japonica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6159..6551)
DNA (393bp) protein (131aa)
Putative signal-transducing histidine kinase n=1 Tax=Haloarcula japonica DSM 6131 RepID=M0L6A5_HALJP
Putative signal-transducing histidine kinase {ECO:0000313|EMBL:EMA28658.1}; TaxID=1227453 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloar
signal-transducing histidine kinase
sw_6_scaffold_47_6
Salinarchaeum sp. Harcht-Bsk1, Salinarchaeum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(6548..7456)
DNA (909bp) protein (303aa)
Histidine kinase n=1 Tax=Salinarchaeum sp. Harcht-Bsk1 RepID=R4W6L7_9EURY
histidine kinase
Histidine kinase {ECO:0000313|EMBL:AGN02402.1}; TaxID=1333523 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Salinarchaeum.;" source="Salinarchaeum sp. Harcht-Bsk1.;"
sw_6_scaffold_47_7
Halorhabdus tiamatea, Halorhabdus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

7567..8712
DNA (1146bp) protein (382aa)
Chaperone protein DnaJ n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PN55_9EURY
dnaJ; chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152}; TaxID=1033806 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halorhabdus.;" source="Halorhabdus tiamatea SA
sw_6_scaffold_47_8
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

8899..9609
DNA (711bp) protein (237aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A6P6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN61168.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_6_scaffold_47_9
Natronobacterium gregoryi, Natronobacterium, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

9781..10560
DNA (780bp) protein (260aa)
Beta-lactamase n=1 Tax=Natronobacterium gregoryi (strain ATCC 43098 / CCM 3738 / NCIMB 2189 / SP2) RepID=L0AHA3_NATGS
Zn-dependent hydrolase
Beta-lactamase {ECO:0000313|EMBL:ELY74326.1}; Zn-dependent hydrolase, glyoxylase {ECO:0000313|EMBL:AFZ72455.1}; TaxID=797304 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae;
sw_6_scaffold_47_10
Natronorubrum sulfidifaciens, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(10561..12585)
DNA (2025bp) protein (675aa)
AMP-dependent synthetase and ligase n=1 Tax=Natronorubrum sulfidifaciens JCM 14089 RepID=L9W322_9EURY
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ELY43686.1}; TaxID=1230460 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum sulf
acyl-CoA synthetase/AMP-acid ligase
sw_6_scaffold_47_11
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(12653..13069)
DNA (417bp) protein (139aa)
DMT superfamily transport protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3INY3_NATPD
hypothetical protein
DMT superfamily transport protein {ECO:0000313|EMBL:CAI50169.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas pha
sw_6_scaffold_47_12
unknown

Not on your lists

comp(13144..13332)
DNA (189bp) protein (63aa)

This feature has no annotations

sw_6_scaffold_47_13
Halococcus thailandensis, Halococcus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13507..13995
DNA (489bp) protein (163aa)
Transcriptional regulator, AsnC family protein n=1 Tax=Halococcus thailandensis JCM 13552 RepID=M0N2G1_9EURY
Transcriptional regulator, AsnC family protein {ECO:0000313|EMBL:EMA52127.1}; TaxID=1227457 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halococcus.;" source="Halo
transcriptional regulator, AsnC family
sw_6_scaffold_47_14
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

13992..15158
DNA (1167bp) protein (389aa)
aspC1; pyridoxal phosphate-dependent aminotransferase (probable aspartate aminotransferase) (EC:2.6.1.-)
Pyridoxal phosphate-dependent aminotransferase (Probable aspartate aminotransferase) {ECO:0000313|EMBL:CCQ36411.1}; EC=2.6.1.- {ECO:0000313|EMBL:CCQ36411.1};; TaxID=268739 species="Archaea; Euryarchae
Pyridoxal phosphate-dependent aminotransferase (Probable aspartate aminotransferase) n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQJ5_NATM8
sw_6_scaffold_47_15
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

15235..17574
DNA (2340bp) protein (780aa)
Type II/IV secretion system ATPase protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP50_NATPD
ATPase
Type II/IV secretion system ATPase protein {ECO:0000313|EMBL:CAI50102.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natrono
sw_6_scaffold_47_16
Natronomonas pharaonis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

17571..19583
DNA (2013bp) protein (671aa)
Type II/IV secretion system transmembrane protein n=1 Tax=Natronomonas pharaonis (strain ATCC 35678 / DSM 2160) RepID=Q3IP51_NATPD
transmembrane protein (type II secretion system proteins TadC)
Type II/IV secretion system transmembrane protein {ECO:0000313|EMBL:CAI50101.1}; TaxID=348780 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="
sw_6_scaffold_47_17
Haloarcula hispanica, Haloarcula, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

19580..20152
DNA (573bp) protein (191aa)
Uncharacterized protein n=2 Tax=Haloarcula hispanica RepID=V5TNX0_HALHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM57598.1}; TaxID=634497 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haloarcula.;" source="Haloarcula hispanica (strain
sw_6_scaffold_47_18
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20152..20793
DNA (642bp) protein (214aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3A4A1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60268.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_6_scaffold_47_19
Halobacterium sp. DL1, Halobacterium, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

20790..22229
DNA (1440bp) protein (480aa)
Putative uncharacterized protein n=1 Tax=Halobacterium sp. DL1 RepID=G4IFJ8_9EURY
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG05244.1}; TaxID=751944 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Halobacterium.;" source="Halobacterium sp. DL1.;"
sw_6_scaffold_47_20
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22226..22669
DNA (444bp) protein (148aa)
Uncharacterized protein n=1 Tax=Haloferax sulfurifontis ATCC BAA-897 RepID=M0INZ6_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ98521.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-
hypothetical protein
sw_6_scaffold_47_21
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

22662..23468
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J2ZHU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60265.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_6_scaffold_47_22
Halogranum salarium, Halogranum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(23465..24970)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Halogranum salarium B-1 RepID=J3JGM5_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EJN60264.1}; TaxID=1210908 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae.;" source="Halogranum salarium B-1.;"
hypothetical protein
sw_6_scaffold_47_23
unknown

Not on your lists

25083..25181
DNA (99bp) protein (33aa)

This feature has no annotations

sw_6_scaffold_47_24
Natronomonas moolapensis, Natronomonas, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25237..25479
DNA (243bp) protein (81aa)
Uncharacterized protein n=1 Tax=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8.8.11) RepID=M1XQ03_NATM8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCQ36174.1}; TaxID=268739 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Natronomonas.;" source="Natronomonas moolapensis (
sw_6_scaffold_47_25
Haloquadratum walsbyi, Haloquadratum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(25409..25885)
DNA (477bp) protein (159aa)
hypothetical protein id=24627745 bin=Haloquadratum_Walsbyi_J07HWQ1 species=Haloquadratum walsbyi genus=Haloquadratum taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=Haloquadratum_Walsbyi_J07HWQ1
Uncharacterized protein {ECO:0000313|EMBL:ERG90495.1}; TaxID=1238424 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloquadratum.;" source="Haloquadratum walsbyi J07HQW
hypothetical protein
sw_6_scaffold_47_26
Candidatus Halobonum tyrrellensis, Candidatus Halobonum, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

25912..26076
DNA (165bp) protein (55aa)
Anion transporter {ECO:0000313|EMBL:ESP88197.1}; TaxID=1324957 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Candidatus Halobonum.;" source="Candidatus Halobonum ty
sw_6_scaffold_47_27
halophilic archaeon J07HB67, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

26251..26979
DNA (729bp) protein (243aa)
CAAX amino terminal protease family n=1 Tax=halophilic archaeon J07HB67 RepID=U1QWR0_9EURY
CAAX amino terminal protease family {ECO:0000313|EMBL:ERH11793.1}; TaxID=1085029 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HB67.;"
hypothetical protein
sw_6_scaffold_47_28
Haladaptatus paucihalophilus, Haladaptatus, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

27072..28649
DNA (1578bp) protein (526aa)
Putative uncharacterized protein n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QY30_9EURY
Uncharacterized protein {ECO:0000313|EMBL:EFW90496.1}; TaxID=797209 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales; Halobacteriaceae; Haladaptatus.;" source="Haladaptatus paucihalophil
hypothetical protein
Displaying 29 items

View Taxonomy